Courant Institute

Research Output 1953 2020

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Review article
2019

Classical and emerging regulatory mechanisms of cytokinesis in animal cells

Verma, V., Mogilner, A. & Maresca, T. J., Sep 1 2019, In : Biology. 8, 3, 55.

Research output: Contribution to journalReview article

Open Access
Myosin Type II
Actomyosin
Cytokinesis
cytokinesis
Chromosomes

Climate Model Uncertainty and Trend Detection in Regional Sea Level Projections: A Review

Carson, M., Lyu, K., Richter, K., Becker, M., Domingues, C. M., Han, W. & Zanna, L., Nov 1 2019, In : Surveys in Geophysics. 40, 6, p. 1631-1653 23 p.

Research output: Contribution to journalReview article

Climate models
climate models
Sea level
sea level
climate modeling

Computational models of auditory perception from feature extraction to stream segregation and behavior

Rankin, J. & Rinzel, J., Oct 1 2019, In : Current Opinion in Neurobiology. 58, p. 46-53 8 p.

Research output: Contribution to journalReview article

Open Access
Auditory Perception
Sound Localization
Pleasure
Music
Hearing

Current approaches for the analysis of spindle organization

Redemann, S., Fürthauer, S., Shelley, M. & Müller-Reichert, T., Jan 1 2019, In : Current Opinion in Structural Biology.

Research output: Contribution to journalReview article

Electron Microscope Tomography
Microtubules
Spindle Apparatus
Caenorhabditis elegans
Cell Division

Deception, identity, and security: The game theory of sybil attacks

Casey, W., Kellner, A., Memarmoshrefi, P., Morales, J. A. & Mishra, B., Jan 1 2019, In : Communications of the ACM. 62, 1, p. 85-93 9 p.

Research output: Contribution to journalReview article

Game theory

Dynamics of flexible fibers in viscous flows and fluids

Du Roure, O., Lindner, A., Nazockdast, E. N. & Shelley, M., Jan 5 2019, In : Annual Review of Fluid Mechanics. 51, p. 539-572 34 p.

Research output: Contribution to journalReview article

viscous fluids
viscous flow
fibers
fluids
low Reynolds number

European Space Agency experiments on thermodiffusion of fluid mixtures in space

Braibanti, M., Artola, P. A., Baaske, P., Bataller, H., Bazile, J. P., Bou-Ali, M. M., Cannell, D. S., Carpineti, M., Cerbino, R., Croccolo, F., Diaz, J., Donev, A., Errarte, A., Ezquerro, J. M., Frutos-Pastor, A., Galand, Q., Galliero, G., Gaponenko, Y., García-Fernández, L., Gavaldá, J. & 35 others, Giavazzi, F., Giglio, M., Giraudet, C., Hoang, H., Kufner, E., Köhler, W., Lapeira, E., Laverón-Simavilla, A., Legros, J. C., Lizarraga, I., Lyubimova, T., Mazzoni, S., Melville, N., Mialdun, A., Minster, O., Montel, F., Molster, F. J., Ortiz de Zárate, J. M., Rodríguez, J., Rousseau, B., Ruiz, X., Ryzhkov, I. I., Schraml, M., Shevtsova, V., Takacs, C. J., Triller, T., Van Vaerenbergh, S., Vailati, A., Verga, A., Vermorel, R., Vesovic, V., Yasnou, V., Xu, S., Zapf, D. & Zhang, K., Jul 1 2019, In : European Physical Journal E. 42, 7, 86.

Research output: Contribution to journalReview article

Thermal Diffusion
Weightlessness
Convection
Complex Mixtures
European Space Agency

Experiment, theory, and the keratocyte: An ode to a simple model for cell motility

Mogilner, A., Barnhart, E. L. & Keren, K., Jan 1 2019, (Accepted/In press) In : Seminars in Cell and Developmental Biology.

Research output: Contribution to journalReview article

Cell Movement
Actins
Cell Shape
Locomotion
Fishes

Fluctuating Hydrodynamics and Debye-Hückel-Onsager Theory for Electrolytes

Donev, A., Garcia, A. L., Péraud, J. P., Nonaka, A. J. & Bell, J. B., Feb 1 2019, In : Current Opinion in Electrochemistry. 13, p. 1-10 10 p.

Research output: Contribution to journalReview article

Electrolytes
Hydrodynamics
Chemical potential
Ions

From cytoskeletal assemblies to living materials

Foster, P. J., Fürthauer, S., Shelley, M. & Needleman, D. J., Feb 1 2019, In : Current Opinion in Cell Biology. 56, p. 109-114 6 p.

Research output: Contribution to journalReview article

Cytoskeleton
Dyneins
Physics
Mechanics
Microtubules

Keeping Score: Predictive Analytics in Policing

Fitzpatrick, D. J., Gorr, W. L. & Neill, D., Jan 13 2019, In : Annual Review of Criminology. 2, p. 473-491 19 p.

Research output: Contribution to journalReview article

police
offense
crime prevention
jurisdiction
evaluation

Towards comprehensive observing and modeling systems for monitoring and predicting regional to coastal sea level

Ponte, R. M., Carson, M., Cirano, M., Domingues, C. M., Jevrejeva, S., Marcos, M., Mitchum, G., van de Wal, R. S. W., Woodworth, P. L., Ablain, M., Ardhuin, F., Ballu, V., Becker, M., Benveniste, J., Birol, F., Bradshaw, E., Cazenave, A., De Mey-Frémaux, P., Durand, F., Ezer, T. & 33 others, Fu, L. L., Fukumori, I., Gordon, K., Gravelle, M., Griffies, S. M., Han, W., Hibbert, A., Hughes, C. W., Idier, D., Kourafalou, V. H., Little, C. M., Matthews, A., Melet, A., Merrifield, M., Meyssignac, B., Minobe, S., Penduff, T., Picot, N., Piecuch, C., Ray, R. D., Rickards, L., Santamaría-Gómez, A., Stammer, D., Staneva, J., Testut, L., Thompson, K., Thompson, P., Vignudelli, S., Williams, J., Simon, S. D., Wöppelmann, G., Zanna, L. & Zhang, X., Jan 1 2019, In : Frontiers in Marine Science. 6, JUL, 437.

Research output: Contribution to journalReview article

Open Access
Sea level
sea level
Monitoring
monitoring
modeling

Transversal fluctuations for a first passage percolation model

Bakhtin, Y. & Wu, W., May 1 2019, In : Annales de l'institut Henri Poincare (B) Probability and Statistics. 55, 2, p. 1042-1060 19 p.

Research output: Contribution to journalReview article

First-passage Percolation
Exponent
Fluctuations
Model
Estimate

Understanding the Seasonal Cycle of Antarctic Sea Ice Extent in the Context of Longer-Term Variability

Eayrs, C., Holland, D., Francis, D. K., Wagner, T., Kumar, R. & Li, X., Jan 1 2019, (Accepted/In press) In : Reviews of Geophysics.

Research output: Contribution to journalReview article

sea ice
cycles
melt
trends
zonal wind
2018

Control Mechanisms of Static and Dynamic Balance in Adults With and Without Vestibular Dysfunction in Oculus Virtual Environments

Lubetzky, A., Hujsak, B. D., Kelly, J. L., Fu, G. & Perlin, K., Nov 1 2018, In : PM and R. 10, 11, p. 1223-1236.e2

Research output: Contribution to journalReview article

Entropy
Reproducibility of Results
Fear
Research Design
Head

Intracellular Fluid Mechanics: Coupling Cytoplasmic Flow with Active Cytoskeletal Gel

Mogilner, A. & Manhart, A., Jan 5 2018, In : Annual Review of Fluid Mechanics. 50, p. 347-370 24 p.

Research output: Contribution to journalReview article

fluid mechanics
gels
cytology
continuum mechanics
organelles

Koopman analysis of the long-term evolution in a turbulent convection cell

Giannakis, D., Kolchinskaya, A., Krasnov, D. & Schumacher, J., Jul 25 2018, In : Journal of Fluid Mechanics. 847, p. 735-767 33 p.

Research output: Contribution to journalReview article

convection cells
Long Term Evolution (LTE)
Eigenvalues and eigenfunctions
eigenvectors
set theory

Lagrangian ocean analysis: Fundamentals and practices

van Sebille, E., Griffies, S. M., Abernathey, R., Adams, T. P., Berloff, P., Biastoch, A., Blanke, B., Chassignet, E. P., Cheng, Y., Cotter, C. J., Deleersnijder, E., Döös, K., Drake, H. F., Drijfhout, S., Gary, S. F., Heemink, A. W., Kjellsson, J., Koszalka, I. M., Lange, M., Lique, C. & 15 others, MacGilchrist, G. A., Marsh, R., Mayorga Adame, C. G., McAdam, R., Nencioli, F., Paris, C. B., Piggott, M. D., Polton, J. A., Rühs, S., Shah, S. H. A. M., Thomas, M. D., Wang, J., Wolfram, P. J., Zanna, L. & Zika, J. D., Jan 2018, In : Ocean Modelling. 121, p. 49-75 27 p.

Research output: Contribution to journalReview article

Open Access
Lagrangian analysis
ocean
trajectory
Trajectories
altimetry

Stellarator Research Opportunities: A Report of the National Stellarator Coordinating Committee

Gates, D. A., Anderson, D., Anderson, S., Zarnstorff, M., Spong, D. A., Weitzner, H., Neilson, G. H., Ruzic, D., Andruczyk, D., Harris, J. H., Mynick, H., Hegna, C. C., Schmitz, O., Talmadge, J. N., Curreli, D., Maurer, D., Boozer, A. H., Knowlton, S., Allain, J. P., Ennis, D. & 29 others, Wurden, G., Reiman, A., Lore, J. D., Landreman, M., Freidberg, J. P., Hudson, S. R., Porkolab, M., Demers, D., Terry, J., Edlund, E., Lazerson, S. A., Pablant, N., Fonck, R., Volpe, F., Canik, J., Granetz, R., Ware, A., Hanson, J. D., Kumar, S., Deng, C., Likin, K., Cerfon, A., Ram, A., Hassam, A., Prager, S., Paz-Soldan, C., Pueschel, M. J., Joseph, I. & Glasser, A. H., Feb 1 2018, In : Journal of Fusion Energy. 37, 1, p. 51-94 44 p.

Research output: Contribution to journalReview article

stellarators
Fusion reactions
Plasmas
fusion
Plasma confinement

Survey of multifidelity methods in uncertainty propagation, inference, and optimization

Peherstorfer, B., Willcox, K. & Gunzburger, M., Jan 1 2018, In : SIAM Review. 60, 3, p. 550-591 42 p.

Research output: Contribution to journalReview article

Uncertainty Propagation
Fidelity
Optimization
Model Evaluation
Multiple Models

The role of submesoscale currents in structuring marine ecosystems

Lévy, M., Franks, P. J. S. & Smith, K. S., Nov 12 2018, In : Nature communications. 9, 1, 1 p.

Research output: Contribution to journalReview article

Open Access
Aquatic ecosystems
Biodiversity
ecosystems
Ecosystem
Productivity

Why are there hotspot mutations in the TP53 gene in human cancers?

Baugh, E. H., Ke, H., Levine, A. J., Bonneau, R. & Chan, C. S., Jan 1 2018, In : Cell Death and Differentiation. 25, 1, p. 154-160 7 p.

Research output: Contribution to journalReview article

p53 Genes
Mutation
Mutant Proteins
Alleles
Neoplasms
2017

Acquisition of a 3 min, two-dimensional glacier velocity field with terrestrial radar interferometry

Voytenko, D., Dixon, T. H., Holland, D. M., Cassotto, R., Howat, I. M., Fahnestock, M. A., Truffer, M. & De La Peña, S., Aug 1 2017, In : Journal of Glaciology. 63, 240, p. 629-636 8 p.

Research output: Contribution to journalReview article

radar interferometry
glacier
radar
flow field
interferometer

Biophysically motivated regulatory network inference: Progress and prospects

Äijö, T. & Bonneau, R., Jan 1 2017, In : Human Heredity. 81, 2, p. 62-77 16 p.

Research output: Contribution to journalReview article

Technology
Chromatin
Research Design
Learning
Genome

Fast randomized iteration: Diffusion Monte Carlo through the lens of numerical linear algebra

Lim, L. H. & Weare, J., Jan 1 2017, In : SIAM Review. 59, 3, p. 547-587 41 p.

Research output: Contribution to journalReview article

Numerical Linear Algebra
Linear algebra
Lens
Lenses
Iteration

Geometric Deep Learning: Going beyond Euclidean data

Bronstein, M. M., Bruna Estrach, J., LeCun, Y., Szlam, A. & Vandergheynst, P., Jul 1 2017, In : IEEE Signal Processing Magazine. 34, 4, p. 18-42 25 p., 7974879.

Research output: Contribution to journalReview article

Euclidean
Social Networks
Social sciences
Computer graphics
Invariance

How much, how fast? A science review and outlook for research on the instability of Antarctica's Thwaites Glacier in the 21st century

Scambos, T. A., Bell, R. E., Alley, R. B., Anandakrishnan, S., Bromwich, D. H., Brunt, K., Christianson, K., Creyts, T., Das, S. B., DeConto, R., Dutrieux, P., Fricker, H. A., Holland, D., MacGregor, J., Medley, B., Nicolas, J. P., Pollard, D., Siegfried, M. R., Smith, A. M., Steig, E. J. & 3 others, Trusel, L. D., Vaughan, D. G. & Yager, P. L., Jun 1 2017, In : Global and Planetary Change. 153, p. 16-34 19 p.

Research output: Contribution to journalReview article

twenty first century
glacier
ice
ice sheet
melt

Logical formalizations of commonsense reasoning: A survey

Davis, E., May 1 2017, In : Journal of Artificial Intelligence Research. 59, p. 651-723 73 p.

Research output: Contribution to journalReview article

Open Access
Artificial intelligence

Lousy advice to the lovelorn

Davis, E., Dec 1 2017, In : Communications of the ACM. 60, 12, p. 33-35 3 p.

Research output: Contribution to journalReview article

Sleep regulation of the distribution of cortical firing rates

Levenstein, D., Watson, B. O., Rinzel, J. & Buzsáki, G., Jun 1 2017, In : Current Opinion in Neurobiology. 44, p. 34-42 9 p.

Research output: Contribution to journalReview article

Sleep
Neurons
Brain

Sticky-sphere clusters

Holmes-Cerfon, M., Mar 31 2017, In : Annual Review of Condensed Matter Physics. 8, p. 77-98 22 p.

Research output: Contribution to journalReview article

Colloids
Electron energy levels
Particles (particulate matter)
Free energy
touch
2016

Agent-based modeling: Case study in cleavage furrow models

Mogilner, A. & Manhart, A., Nov 7 2016, In : Molecular Biology of the Cell. 27, 22, p. 3379-3384 6 p.

Research output: Contribution to journalReview article

Systems Analysis
Cell Biology
History
Recognition (Psychology)

Enumerating rigid sphere packings

Holmes-Cerfon, M., 2016, In : SIAM Review. 58, 2, p. 229-244 16 p.

Research output: Contribution to journalReview article

Sphere packing
Biological systems
Rigidity
Contact
Packing
2015

Complex singularities and PDEs

Caflisch, R., Gargano, F., Sammartino, M. & Sciacca, V., 2015, In : Rivista di Matematica della Universita di Parma. 6, 1, p. 69-133 65 p.

Research output: Contribution to journalReview article

Singularity
Singularity Analysis
Fourier Spectrum
Kadomtsev-Petviashvili Equation
Padé Approximation

Demystifying Quadrilateral Remeshing

Panozzo, D., Mar 1 2015, In : IEEE Computer Graphics and Applications. 35, 2, p. 88-95 8 p., 7064658.

Research output: Contribution to journalReview article

Special effects
2014

Decoding binary node labels from censored edge measurements: Phase transition and efficient recovery

Abbe, E., Bandeira, A., Bracher, A. & Singer, A., Jan 1 2014, In : IEEE Transactions on Network Science and Engineering. 1, 1, p. 10-22 13 p., 6949658.

Research output: Contribution to journalReview article

Decoding
Labels
Phase transitions
Recovery
Inverse problems

Ginzburg-Landau Vortices, Coulomb Gases, and Renormalized Energies

Serfaty, S., Feb 2014, In : Journal of Statistical Physics. 154, 3, p. 660-680 21 p.

Research output: Contribution to journalReview article

Coulomb Gas
Ginzburg-Landau Model
Ginzburg-Landau
Superconductivity
Vortex
2013

Singular vectors, predictability and ensemble forecasting for weather and climate

Palmer, T. N. & Zanna, L., Jun 28 2013, In : Journal of Physics A: Mathematical and Theoretical. 46, 25, 254018.

Research output: Contribution to journalReview article

Singular Vectors
Predictability
weather
Climate
Weather
2012

Steered transition path sampling

Guttenberg, N., Dinner, A. R. & Weare, J., Jun 21 2012, In : Journal of Chemical Physics. 136, 23, 234103.

Research output: Contribution to journalReview article

sampling
Sampling
transition probabilities
estimating
trajectories
2003

Quantum random walks: An introductory overview

Kempe, J., Jan 1 2003, In : Contemporary Physics. 44, 4, p. 307-327 21 p.

Research output: Contribution to journalReview article

random walk