Faculty of Arts and Science

Research Output 1952 2020

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2019

1 H-decoupling and Isotopic Labeling for the Measurement of the Longitudinal Relaxation Time of Hyperpolarized 13 C-Methylenes in Choline Analogs

Uppala, S., Gamliel, A., Harris, T., Sosna, J., Gomori, J. M., Jerschow, A. & Katz-Brull, R., Jan 1 2019, In : Israel Journal of Chemistry.

Research output: Contribution to journalArticle

Choline
Relaxation time
Labeling
Protons
Polarization

Ab Initio Molecular Dynamics Study of Hydroxide Diffusion Mechanisms in Nanoconfined Structural Mimics of Anion Exchange Membranes

Zelovich, T., Long, Z., Hickner, M., Paddison, S. J., Bae, C. & Tuckerman, M., Feb 28 2019, In : Journal of Physical Chemistry C. 123, 8, p. 4638-4653 16 p.

Research output: Contribution to journalArticle

hydroxides
Anions
Molecular dynamics
Ion exchange
Negative ions
entropy
Free energy
Permittivity
Entropy
Proteins

A comparison of the prevalence of psychiatric disorders in Puerto Rico with the United States and the Puerto Rican population of the United States

Canino, G., Shrout, P., NeMoyer, A., Vila, D., Santiago, K. M., Garcia, P., Quiñones, A., Cruz, V. & Alegria, M., Jan 1 2019, (Accepted/In press) In : Social Psychiatry and Psychiatric Epidemiology.

Research output: Contribution to journalArticle

Puerto Rico
Psychiatry
social support
Hispanic Americans
Social Support

A complete statistical model for calibration of RNA-seq counts using external spike-ins and maximum likelihood theory

Athanasiadou, R., Neymotin, B., Brandt, N., Wang, W., Christiaen, L., Gresham, D. & Tranchina, D., Mar 1 2019, In : PLoS computational biology. 15, 3, p. e1006794

Research output: Contribution to journalArticle

Open Access
Statistical Models
statistical models
RNA
Spike
Calibration

Activation is not always inference: Word-based priming in spontaneous trait inferences

Orghian, D., Ramos, T., Garcia-Marques, L. & Uleman, J., Jan 1 2019, In : Social Cognition. 37, 2, p. 145-173 29 p.

Research output: Contribution to journalArticle

Personality
Recognition (Psychology)

A Distributional Framework for Matched Employer Employee Data

Bonhomme, S., Lamadon, T. & Manresa, E., May 1 2019, In : Econometrica. 87, 3, p. 699-739 41 p.

Research output: Contribution to journalArticle

Open Access
Matched employer-employee data
Job mobility
Sorting
Workers
Wages

A diverse range of factors affect the nature of neural representations underlying short-term memory

Orhan, A. E. & Ma, W. J., Feb 1 2019, In : Nature Neuroscience. 22, 2, p. 275-283 9 p.

Research output: Contribution to journalArticle

Short-Term Memory
Population
Neurons
Brain

A division of labor between power and phase coherence in encoding attention to stimulus streams

Tavano, A. & Poeppel, D., Jun 1 2019, In : NeuroImage. 193, p. 146-156 11 p.

Research output: Contribution to journalArticle

Reaction Time
Power (Psychology)

Adult-born hippocampal neurons bidirectionally modulate entorhinal inputs into the dentate gyrus

Luna, V. M., Anacker, C., Burghardt, N. S., Khandaker, H., Andreu, V., Millette, A., Leary, P., Ravenelle, R., Jimenez, J. C., Mastrodonato, A., Denny, C. A., Fenton, A., Scharfman, H. E. & Hen, R., Jan 1 2019, In : Science. 364, 6440, p. 578-583 6 p.

Research output: Contribution to journalArticle

Dentate Gyrus
Neurons
Entorhinal Cortex
Metabotropic Glutamate Receptors
N-Methyl-D-Aspartate Receptors

A Fragment Quantum Mechanical Method for Metalloproteins

Xu, M., He, X., Zhu, T. & Zhang, J., Jan 1 2019, (Accepted/In press) In : Journal of Chemical Theory and Computation.

Research output: Contribution to journalArticle

Metalloproteins
Potential energy
potential energy
fragments
Structural optimization

Altered steady state and activity-dependent de novo protein expression in fragile X syndrome

Bowling, H., Bhattacharya, A., Zhang, G., Alam, D., Lebowitz, J. Z., Bohm-Levine, N., Lin, D., Singha, P., Mamcarz, M., Puckett, R., Zhou, L., Aryal, S., Sharp, K., Kirshenbaum, K., Berry-Kravis, E., Neubert, T. A. & Klann, E., Dec 1 2019, In : Nature Communications. 10, 1, 1710.

Research output: Contribution to journalArticle

Open Access
Fragile X Syndrome
proteins
Blood
blood
mice

A matter of timing

Perry, M. W. & Desplan, C., Jan 1 2019, In : eLife. 8

Research output: Contribution to journalArticle

A monetary model of bilateral over-the-counter markets

Lagos, R. & Zhang, S., Jan 1 2019, In : Review of Economic Dynamics.

Research output: Contribution to journalArticle

Bilateral
Monetary policy
Liquidity
Asset prices
Assets

An Analysis of Decision under Risk in Rats

Constantinople, C., Piet, A. T. & Brody, C. D., Jun 17 2019, In : Current Biology. 29, 12, p. 2066-2074.e5

Research output: Contribution to journalArticle

Decision Support Techniques
Rats
learning
Learning
rats

An asymmetrical president-in-power effect

Morisi, D., Jost, J. & Singh, V., May 1 2019, In : American Political Science Review. 113, 2, p. 614-620 7 p.

Research output: Contribution to journalArticle

president
asymmetry
polarization
legitimacy
ideology

A neural signature of pattern separation in the monkey hippocampus

Sakon, J. J. & Suzuki, W., May 7 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 19, p. 9634-9643 10 p.

Research output: Contribution to journalArticle

Haplorhini
Hippocampus
Dentate Gyrus
Neurons
Parahippocampal Gyrus

A neuromechanistic model for rhythmic beat generation

Bose, A., Byrne, Á. & Rinzel, J., May 1 2019, In : PLoS computational biology. 15, 5, p. e1006450

Research output: Contribution to journalArticle

Open Access
Beat
Music
music
Synchronization
Generator

An extended dual graph library and partitioning algorithm applicable to pseudoknotted RNA structures

Jain, S., Saju, S., Petingi, L. & Schlick, T., Jan 1 2019, In : Methods.

Research output: Contribution to journalArticle

Libraries
RNA
Topology
Nucleic Acid Databases
Graph theory
Authoritarianism
Anger
authoritarianism
anger
Fear

An oscillator model better predicts cortical entrainment to music

Doelling, K. B., Florencia Assaneo, M., Bevilacqua, D., Pesaran, B. & Poeppel, D., May 14 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 20, p. 10113-10121 9 p.

Research output: Contribution to journalArticle

Open Access
Auditory Cortex
Music
Magnetoencephalography
Phonetics
Research

Are consumers poorly informed about fuel economy? Evidence from two experiments

Allcott, H. & Knittel, C., Feb 1 2019, In : American Economic Journal: Economic Policy. 11, 1, p. 1-37 37 p.

Research output: Contribution to journalArticle

Experiment
Information economy
Imperfect information
Economic effect
Optimal policy
Linguistics
autism
infant
pragmatics
Language

A single-cell transcriptional roadmap for cardiopharyngeal fate diversification

Wang, W., Niu, X., Stuart, T., Jullian, E., Mauck, W. M., Kelly, R. G., Satija, R. & Christiaen, L., Jun 1 2019, In : Nature Cell Biology. 21, 6, p. 674-686 13 p.

Research output: Contribution to journalArticle

Pharyngeal Muscles
Chordata
Head
Muscles
Mesoderm

Assessing recall bias and measurement error in high-frequency social data collection for human-environment research

Bell, A., Ward, P., Tamal, E. H. & Killilea, M., Jan 1 2019, In : Population and Environment.

Research output: Contribution to journalArticle

social data
trend
household survey
experience
natural sciences

Assessment of the Silver Penetration and Distribution in Carious Lesions of Deciduous Teeth Treated with Silver Diamine Fluoride

Li, Y., Liu, Y., Psoter, W. J., Nguyen, O. M., Bromage, T., Walters, M., Hu, B., Rabieh, S. & Kumararaja, F. C., Jan 1 2019, In : Caries Research.

Research output: Contribution to journalArticle

Deciduous Tooth
Silver
X-Ray Emission Spectrometry
Dental Enamel
Electron Scanning Microscopy

Attendance at Well-Child Visits After Reach Out and Read

Needlman, R. D., Dreyer, B. P., Klass, P. & Mendelsohn, A. L., Jan 1 2019, (Accepted/In press) In : Clinical Pediatrics.

Research output: Contribution to journalArticle

Parents
Preventive Medicine
Periodicity
Hispanic Americans
Appointments and Schedules

Bacillus subtilis spore resistance to simulated mars surface conditions

Cortesão, M., Fuchs, F. M., Commichau, F. M., Eichenberger, P., Schuerger, A. C., Nicholson, W. L., Setlow, P. & Moeller, R., Jan 1 2019, In : Frontiers in Microbiology. 10, FEB, 333.

Research output: Contribution to journalArticle

Open Access
Mars
Bacillus subtilis
Spores
Radiation
DNA Damage

Bank capital, fire sales, and the social value of deposits

Gale, D. & Yorulmazer, T., Jan 1 2019, In : Economic Theory.

Research output: Contribution to journalArticle

Bank capital
Deposits
Social values
Funding
Subsidies

BAR-based optimum adaptive steered MD for configurational sampling

Wang, X., Tu, X., Deng, B., Zhang, J. & Sun, Z., Jan 1 2019, In : Journal of Computational Chemistry.

Research output: Contribution to journalArticle

Surface mount technology
Sampling
Adaptive Sampling
Free energy
Adaptive Method

Bidirectional sliding of two parallel microtubules generated by multiple identical motors

Allard, J., Doumic, M., Mogilner, A. & Oelz, D., Jan 1 2019, In : Journal of Mathematical Biology.

Research output: Contribution to journalArticle

Microtubules
microtubules
Continuous-time Markov Process
Molecular Motor
Markov Chains

Big Data to the Bench: Transcriptome Analysis for Undergraduates

Procko, C., Morrison, S., Dunar, C., Mills, S., Maldonado, B., Cockrum, C., Peters, N. E., Huang, S-S. & Chory, J., Jun 1 2019, In : CBE life sciences education. 18, 2, p. ar19

Research output: Contribution to journalArticle

Open Access
Gene Expression Profiling
Students
biology
RNA
Computational methods
Tacrolimus Binding Proteins
Technology
Molecular Dynamics Simulation
Steroid Receptors
Drug Design

Biomimetic Approach Toward Enterocin and Deoxyenterocin

Rizzo, A., Mayer, R. J. & Trauner, D., Feb 1 2019, In : Journal of Organic Chemistry. 84, 3, p. 1162-1175 14 p.

Research output: Contribution to journalArticle

Biomimetics
Biological Products
Polyketides
Ketones
Discrete Fourier transforms

Body Mass Index in Multiple Sclerosis modulates ceramide-induced DNA methylation and disease course

Castro, K., Ntranos, A., Amatruda, M., Petracca, M., Kosa, P., Chen, E. Y., Morstein, J., Trauner, D., Watson, C. T., Kiebish, M. A., Bielekova, B., Inglese, M., Katz Sand, I. & Casaccia, P., Jan 1 2019, In : EBioMedicine.

Research output: Contribution to journalArticle

Open Access
Ceramides
DNA Methylation
Multiple Sclerosis
Body Mass Index
Genes

Brief, daily meditation enhances attention, memory, mood, and emotional regulation in non-experienced meditators

Basso, J. C., McHale, A., Ende, V., Oberlin, D. J. & Suzuki, W., Jan 1 2019, In : Behavioural Brain Research. 356, p. 208-220 13 p.

Research output: Contribution to journalArticle

Meditation
Webcasts
Exercise Test
Control Groups
Short-Term Memory

Bringing close others to the emergency department for an acute coronary event is associated with increased patient perception of threat

Cornelius, T., Meli, L., Thorson, K. R., Chang, B. P., Edmondson, D. & West, T., Jan 1 2019, In : General Hospital Psychiatry. 56, p. 42-49 8 p.

Research output: Contribution to journalArticle

Acute Coronary Syndrome
Post-Traumatic Stress Disorders
Hospital Emergency Service
Medication Adherence
Checklist

Capital Share Risk in U.S. Asset Pricing

Lettau, M., Ludvigson, S. & Ma, S., Jan 1 2019, In : Journal of Finance.

Research output: Contribution to journalArticle

Finance
Asset pricing
Assets
Income
Macroeconomic factors

Causal inference accounts for heading perception in the presence of object motion

Dokka, K., Park, H., Jansen, M., DeAngelis, G. C. & Angelaki, D., Apr 30 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 18, p. 9060-9065 6 p.

Research output: Contribution to journalArticle

Brain
Cues

Children lose confidence in their potential to “be scientists,” but not in their capacity to “do science”

Lei, R. F., Green, E. R., Leslie, S. J. & Rhodes, M., Jan 1 2019, In : Developmental Science. e12837.

Research output: Contribution to journalArticle

Language
Emotions
Cross-Sectional Studies
Research

Choice-Related Activity during Visual Slant Discrimination in Macaque CIP But Not V3A

Elmore, L. C., Rosenberg, A., DeAngelis, G. C. & Angelaki, D., Mar 1 2019, In : eNeuro. 6, 2

Research output: Contribution to journalArticle

Open Access
Macaca
Neurons
Haplorhini
Discrimination (Psychology)

Choice-theoretic foundations of the divisive normalization model

Steverson, K., Brandenburger, A. & Glimcher, P., Aug 1 2019, In : Journal of Economic Behavior and Organization. 164, p. 148-165 18 p.

Research output: Contribution to journalArticle

Open Access
Normalization
Axiomatic characterization
Information processing
Expected value
Equivalence theorem

Circuit mechanisms for the maintenance and manipulation of information in working memory

Masse, N. Y., Yang, G. R., Song, H. F., Wang, X-J. & Freedman, D. J., Jul 1 2019, In : Nature Neuroscience. 22, 7, p. 1159-1167 9 p.

Research output: Contribution to journalArticle

Short-Term Memory
Maintenance
Neuronal Plasticity
Learning
Neural Networks (Computer)

Coalitional Expected Multi-Utility Theory

Hara, K., Ok, A. & Riella, G., May 1 2019, In : Econometrica. 87, 3, p. 933-980 48 p.

Research output: Contribution to journalArticle

Transitivity
Expected utility
Utility theory
Preference relation
Completeness

Coalition governance with incomplete information

Dragu, T. & Laver, M., Jan 1 2019, In : Journal of Politics.

Research output: Contribution to journalArticle

coalition
governance
compromise
decision making
minister

Cobalt-Catalyzed Intramolecular Silylperoxidation of Unsaturated Diisopropylsilyl Ethers

Oswald, J. P. & Woerpel, K., Jun 21 2019, In : Journal of Organic Chemistry. 84, 12, p. 7564-7574 11 p.

Research output: Contribution to journalArticle

Acetals
Ethers
Peroxides
Cobalt

Colloidal Organosilica Spheres for Three-Dimensional Confocal Microscopy

Liu, Y., Yanagishima, T., Curran, A., Edmond, K. V., Sacanna, S. & Dullens, R. P. A., Jun 18 2019, In : Langmuir. 35, 24, p. 7962-7969 8 p.

Research output: Contribution to journalArticle

Confocal microscopy
microscopy
Optical tweezers
Polydispersity
Phase behavior

Combining Iteration-Free Polarization with Large Time Step Stochastic-Isokinetic Integration

Albaugh, A., Tuckerman, M. & Head-Gordon, T., Apr 9 2019, In : Journal of Chemical Theory and Computation. 15, 4, p. 2195-2205 11 p.

Research output: Contribution to journalArticle

iteration
self consistent fields
Molecular dynamics
Polarization
Potential energy surfaces
climate change
cultural factors
social factors
environmental factors
Late Medieval Period

Comparative Epigenomics Reveals that RNA Polymerase II Pausing and Chromatin Domain Organization Control Nematode piRNA Biogenesis

Beltran, T., Barroso, C., Birkle, T. Y., Stevens, L., Schwartz, H. T., Sternberg, P. W., Fradin, H., Gunsalus, K., Piano, F., Sharma, G., Cerrato, C., Ahringer, J., Martínez-Pérez, E., Blaxter, M. & Sarkies, P., Mar 25 2019, In : Developmental Cell. 48, 6, p. 793-810.e6

Research output: Contribution to journalArticle

Open Access
RNA Polymerase II
Epigenomics
Small Interfering RNA
Chromatin
Caenorhabditis elegans