Faculty of Arts and Science

Research Output 1952 2020

Filter
Article
2020

Teachers’ belief that math requires innate ability predicts lower intrinsic motivation among low-achieving students

Heyder, A., Weidinger, A. F., Cimpian, A. & Steinmayr, R., Feb 1 2020, In : Learning and Instruction. 65, 101220.

Research output: Contribution to journalArticle

Aptitude
intrinsic motivation
Motivation
Students
ability
2019

1 H-decoupling and Isotopic Labeling for the Measurement of the Longitudinal Relaxation Time of Hyperpolarized 13 C-Methylenes in Choline Analogs

Uppala, S., Gamliel, A., Harris, T., Sosna, J., Gomori, J. M., Jerschow, A. & Katz-Brull, R., Jan 1 2019, In : Israel Journal of Chemistry.

Research output: Contribution to journalArticle

Choline
Relaxation time
Labeling
Protons
Polarization

Ab Initio Molecular Dynamics Study of Hydroxide Diffusion Mechanisms in Nanoconfined Structural Mimics of Anion Exchange Membranes

Zelovich, T., Long, Z., Hickner, M., Paddison, S. J., Bae, C. & Tuckerman, M., Feb 28 2019, In : Journal of Physical Chemistry C. 123, 8, p. 4638-4653 16 p.

Research output: Contribution to journalArticle

hydroxides
Anions
Molecular dynamics
Ion exchange
Negative ions

A case study in the functional consequences of scaling the sizes of realistic cortical models

Joglekar, M. R., Chariker, L., Shapley, R. & Young, L-S., Jul 1 2019, In : PLoS computational biology. 15, 7, e1007198.

Research output: Contribution to journalArticle

Open Access
Aptitude
Scaling
Visual Cortex
case studies
Neurons

Accelerated Molecular Dynamics Simulation for Helical Proteins Folding in Explicit Water

Duan, L., Guo, X., Cong, Y., Feng, G., Li, Y. & Zhang, J., Aug 6 2019, In : Frontiers in Chemistry. 7, 540.

Research output: Contribution to journalArticle

Open Access
Protein folding
Molecular dynamics
Water
Computer simulation
Temperature
entropy
Free energy
Permittivity
Entropy
Proteins

A comparison of the prevalence of psychiatric disorders in Puerto Rico with the United States and the Puerto Rican population of the United States

Canino, G., Shrout, P., NeMoyer, A., Vila, D., Santiago, K. M., Garcia, P., Quiñones, A., Cruz, V. & Alegria, M., Jan 1 2019, (Accepted/In press) In : Social Psychiatry and Psychiatric Epidemiology.

Research output: Contribution to journalArticle

Puerto Rico
Psychiatry
social support
Hispanic Americans
Social Support

A complete statistical model for calibration of RNA-seq counts using external spike-ins and maximum likelihood theory

Athanasiadou, R., Neymotin, B., Brandt, N., Wang, W., Christiaen, L., Gresham, D. & Tranchina, D., Mar 1 2019, In : PLoS computational biology. 15, 3, p. e1006794

Research output: Contribution to journalArticle

Open Access
Statistical Models
statistical models
RNA
Spike
Calibration

A Conserved Allosteric Pathway in Tyrosine Kinase Regulation

Marsiglia, W. M., Katigbak, J., Zheng, S., Mohammadi, M., Zhang, Y. & Traaseth, N., Aug 6 2019, In : Structure. 27, 8, p. 1308-1315.e3

Research output: Contribution to journalArticle

Isoleucine
Phenylalanine
Protein-Tyrosine Kinases
Phosphotransferases
Mutation

A conserved regulatory program initiates lateral plate mesoderm emergence across chordates

Prummel, K. D., Hess, C., Nieuwenhuize, S., Parker, H. J., Rogers, K. W., Kozmikova, I., Racioppi, C., Brombacher, E. C., Czarkwiani, A., Knapp, D., Burger, S., Chiavacci, E., Shah, G., Burger, A., Huisken, J., Yun, M. H., Christiaen, L., Kozmik, Z., Müller, P., Bronner, M. & 2 others, Krumlauf, R. & Mosimann, C., Dec 1 2019, In : Nature Communications. 10, 1, 3857.

Research output: Contribution to journalArticle

Open Access
Chordata
Mesoderm
Prednisolone
Muscle
Zebrafish

A Conversation with Jacob Nachmias

Nachmias, J., Movshon, J. A., Wandell, B. A. & Brainard, D. H., Sep 15 2019, In : Annual review of vision science. 5, p. 1-13 13 p.

Research output: Contribution to journalArticle

Open Access
National Socialism
Psychology
Greece
Eye Movements
Psychological Signal Detection

Activation is not always inference: Word-based priming in spontaneous trait inferences

Orghian, D., Ramos, T., Garcia-Marques, L. & Uleman, J., Jan 1 2019, In : Social Cognition. 37, 2, p. 145-173 29 p.

Research output: Contribution to journalArticle

Personality
Recognition (Psychology)

A Distributional Framework for Matched Employer Employee Data

Bonhomme, S., Lamadon, T. & Manresa, E., May 1 2019, In : Econometrica. 87, 3, p. 699-739 41 p.

Research output: Contribution to journalArticle

Open Access
Matched employer-employee data
Workers
Wages
Unobserved heterogeneity
Interaction

A diverse range of factors affect the nature of neural representations underlying short-term memory

Orhan, A. E. & Ma, W. J., Feb 1 2019, In : Nature Neuroscience. 22, 2, p. 275-283 9 p.

Research output: Contribution to journalArticle

Short-Term Memory
Population
Neurons
Brain

A division of labor between power and phase coherence in encoding attention to stimulus streams

Tavano, A. & Poeppel, D., Jun 1 2019, In : NeuroImage. 193, p. 146-156 11 p.

Research output: Contribution to journalArticle

Reaction Time
Power (Psychology)

Adult-born hippocampal neurons bidirectionally modulate entorhinal inputs into the dentate gyrus

Luna, V. M., Anacker, C., Burghardt, N. S., Khandaker, H., Andreu, V., Millette, A., Leary, P., Ravenelle, R., Jimenez, J. C., Mastrodonato, A., Denny, C. A., Fenton, A., Scharfman, H. E. & Hen, R., Jan 1 2019, In : Science. 364, 6440, p. 578-583 6 p.

Research output: Contribution to journalArticle

Dentate Gyrus
Neurons
Entorhinal Cortex
Metabotropic Glutamate Receptors
N-Methyl-D-Aspartate Receptors

A force consistent method for electrostatic energy calculation in fluctuating charge model

Duan, G., Ji, C. & Zhang, J., Sep 7 2019, In : Journal of Chemical Physics. 151, 9, 094105.

Research output: Contribution to journalArticle

Open Access
Electrostatics
electrostatics
energy
Coulomb interactions
Molecular dynamics

A Fragment Quantum Mechanical Method for Metalloproteins

Xu, M., He, X., Zhu, T. & Zhang, J., Jan 1 2019, (Accepted/In press) In : Journal of Chemical Theory and Computation.

Research output: Contribution to journalArticle

Metalloproteins
Potential energy
potential energy
fragments
Structural optimization

Altered steady state and activity-dependent de novo protein expression in fragile X syndrome

Bowling, H., Bhattacharya, A., Zhang, G., Alam, D., Lebowitz, J. Z., Bohm-Levine, N., Lin, D., Singha, P., Mamcarz, M., Puckett, R., Zhou, L., Aryal, S., Sharp, K., Kirshenbaum, K., Berry-Kravis, E., Neubert, T. A. & Klann, E., Dec 1 2019, In : Nature Communications. 10, 1, 1710.

Research output: Contribution to journalArticle

Open Access
Fragile X Syndrome
proteins
Blood
blood
mice

A matter of timing

Perry, M. W. & Desplan, C., Jan 1 2019, In : eLife. 8

Research output: Contribution to journalArticle

A model-based reassessment of the three-dimensional tuning of head direction cells in rats

Laurens, J. & Angelaki, D., Sep 1 2019, In : Journal of neurophysiology. 122, 3, p. 1274-1287 14 p.

Research output: Contribution to journalArticle

Head
Gravitation
Anterior Thalamic Nuclei
Yaws
Direction compound

A monetary model of bilateral over-the-counter markets

Lagos, R. & Zhang, S., Jan 1 2019, In : Review of Economic Dynamics.

Research output: Contribution to journalArticle

Bilateral
Monetary policy
Liquidity
Asset prices
Assets

An Analysis of Decision under Risk in Rats

Constantinople, C., Piet, A. T. & Brody, C. D., Jun 17 2019, In : Current Biology. 29, 12, p. 2066-2074.e5

Research output: Contribution to journalArticle

Decision Support Techniques
Rats
learning
Learning
rats

An asymmetrical president-in-power effect

Morisi, D., Jost, J. & Singh, V., May 1 2019, In : American Political Science Review. 113, 2, p. 614-620 7 p.

Research output: Contribution to journalArticle

president
asymmetry
polarization
legitimacy
ideology

A neural signature of pattern separation in the monkey hippocampus

Sakon, J. J. & Suzuki, W., May 7 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 19, p. 9634-9643 10 p.

Research output: Contribution to journalArticle

Haplorhini
Hippocampus
Dentate Gyrus
Neurons
Parahippocampal Gyrus

A neuromechanistic model for rhythmic beat generation

Bose, A., Byrne, Á. & Rinzel, J., May 1 2019, In : PLoS computational biology. 15, 5, p. e1006450

Research output: Contribution to journalArticle

Open Access
Beat
Music
music
Synchronization
Generator

An extended dual graph library and partitioning algorithm applicable to pseudoknotted RNA structures

Jain, S., Saju, S., Petingi, L. & Schlick, T., Jan 1 2019, In : Methods.

Research output: Contribution to journalArticle

Libraries
RNA
Topology
Nucleic Acid Databases
Graph theory
Authoritarianism
Anger
authoritarianism
anger
Fear
Randomized Controlled Trials
Smoking
Tobacco Products
Self Report
Outcome Assessment (Health Care)

An oscillator model better predicts cortical entrainment to music

Doelling, K. B., Florencia Assaneo, M., Bevilacqua, D., Pesaran, B. & Poeppel, D., May 14 2019, In : Proceedings of the National Academy of Sciences of the United States of America. 116, 20, p. 10113-10121 9 p.

Research output: Contribution to journalArticle

Open Access
Auditory Cortex
Music
Magnetoencephalography
Phonetics
Research

Applying regression discontinuity designs to American political development

Harvey, A., Jan 1 2019, In : Public Choice.

Research output: Contribution to journalArticle

political development
regression
macro level
law enforcement
civil servant

Are consumers poorly informed about fuel economy? Evidence from two experiments

Allcott, H. & Knittel, C., Feb 1 2019, In : American Economic Journal: Economic Policy. 11, 1, p. 1-37 37 p.

Research output: Contribution to journalArticle

Experiment
Information economy
Imperfect information
Economic effect
Optimal policy
Linguistics
autism
infant
pragmatics
Language

A single-cell transcriptional roadmap for cardiopharyngeal fate diversification

Wang, W., Niu, X., Stuart, T., Jullian, E., Mauck, W. M., Kelly, R. G., Satija, R. & Christiaen, L., Jun 1 2019, In : Nature Cell Biology. 21, 6, p. 674-686 13 p.

Research output: Contribution to journalArticle

Pharyngeal Muscles
Chordata
Head
Muscles
Mesoderm

Assembly of clathrates from tetrahedral patchy colloids with narrow patches

Noya, E. G., Zubieta, I., Pine, D. & Sciortino, F., Sep 7 2019, In : Journal of Chemical Physics. 151, 9, 094502.

Research output: Contribution to journalArticle

Diamond
clathrates
Colloids
colloids
assembly

Assessing recall bias and measurement error in high-frequency social data collection for human-environment research

Bell, A., Ward, P., Tamal, E. H. & Killilea, M., Jan 1 2019, In : Population and Environment.

Research output: Contribution to journalArticle

social data
trend
household survey
experience
natural sciences

Assessment of the Silver Penetration and Distribution in Carious Lesions of Deciduous Teeth Treated with Silver Diamine Fluoride

Li, Y., Liu, Y., Psoter, W. J., Nguyen, O. M., Bromage, T., Walters, M., Hu, B., Rabieh, S. & Kumararaja, F. C., Jan 1 2019, In : Caries Research.

Research output: Contribution to journalArticle

Deciduous Tooth
Silver
X-Ray Emission Spectrometry
Dental Enamel
Electron Scanning Microscopy

A standardized nomenclature and atlas of the male terminalia of Drosophila melanogaster

Rice, G., David, J. R., Kamimura, Y., Masly, J. P., Mcgregor, A. P., Nagy, O., Noselli, S., Nunes, M. D. S., O’Grady, P., Sánchez-Herrero, E., Siegal, M., Toda, M. J., Rebeiz, M., Courtier-Orgogozo, V. & Yassin, A., Jan 1 2019, (Accepted/In press) In : Fly.

Research output: Contribution to journalArticle

Terminalia
genitalia
Drosophila melanogaster
terminology
rendering

Attendance at Well-Child Visits After Reach Out and Read

Needlman, R. D., Dreyer, B. P., Klass, P. & Mendelsohn, A. L., Jan 1 2019, (Accepted/In press) In : Clinical Pediatrics.

Research output: Contribution to journalArticle

Parents
Preventive Medicine
Periodicity
Hispanic Americans
Appointments and Schedules

Attentional Capture Helps Explain Why Moral and Emotional Content Go Viral

Brady, W. J., Gantman, A. P. & Van Bavel, J., Jan 1 2019, (Accepted/In press) In : Journal of Experimental Psychology: General.

Research output: Contribution to journalArticle

Social Media
Arousal
Psychology

Aversive learning strengthens episodic memory in both adolescents and adults

Cohen, A. O., Matese, N. G., Filimontseva, A., Shen, X., Shi, T. C., Livne, E. & Hartley, C., Jul 1 2019, In : Learning & memory (Cold Spring Harbor, N.Y.). 26, 7, p. 272-279 8 p.

Research output: Contribution to journalArticle

Open Access
Episodic Memory
Learning
Arousal
Rodentia
Age Groups

Bacillus subtilis spore resistance to simulated mars surface conditions

Cortesão, M., Fuchs, F. M., Commichau, F. M., Eichenberger, P., Schuerger, A. C., Nicholson, W. L., Setlow, P. & Moeller, R., Jan 1 2019, In : Frontiers in Microbiology. 10, FEB, 333.

Research output: Contribution to journalArticle

Open Access
Mars
Bacillus subtilis
Spores
Radiation
DNA Damage

Bank capital, fire sales, and the social value of deposits

Gale, D. & Yorulmazer, T., Jan 1 2019, In : Economic Theory.

Research output: Contribution to journalArticle

Bank capital
Deposits
Social values
Funding
Subsidies

BAR-based optimum adaptive steered MD for configurational sampling

Wang, X., Tu, X., Deng, B., Zhang, J. & Sun, Z., Jan 1 2019, In : Journal of Computational Chemistry.

Research output: Contribution to journalArticle

Surface mount technology
Sampling
Adaptive Sampling
Free energy
Adaptive Method

Bicoid-Dependent Activation of the Target Gene hunchback Requires a Two-Motif Sequence Code in a Specific Basal Promoter

Ling, J., Umezawa, K. Y., Scott, T. & Small, S., Sep 19 2019, In : Molecular Cell. 75, 6, p. 1178-1187.e4

Research output: Contribution to journalArticle

Transcriptional Activation
Transcription Factors

Bidirectional sliding of two parallel microtubules generated by multiple identical motors

Allard, J., Doumic, M., Mogilner, A. & Oelz, D., Jan 1 2019, In : Journal of Mathematical Biology.

Research output: Contribution to journalArticle

Microtubules
microtubules
Continuous-time Markov Process
Molecular Motor
Markov Chains

Big Data to the Bench: Transcriptome Analysis for Undergraduates

Procko, C., Morrison, S., Dunar, C., Mills, S., Maldonado, B., Cockrum, C., Peters, N. E., Huang, S-S. & Chory, J., Jun 1 2019, In : CBE life sciences education. 18, 2, p. ar19

Research output: Contribution to journalArticle

Open Access
Gene Expression Profiling
Students
biology
RNA
Computational methods
Tacrolimus Binding Proteins
Technology
Molecular Dynamics Simulation
Steroid Receptors
Drug Design

Binding of an X-Specific Condensin Correlates with a Reduction in Active Histone Modifications at Gene Regulatory Elements

Street, L. A., Morao, A. K., Winterkorn, L. H., Jiao, C. Y., Albritton, S. E., Sadic, M., Kramer, M. & Ercan, S., Jul 1 2019, In : Genetics. 212, 3, p. 729-742 14 p.

Research output: Contribution to journalArticle

Histone Code
Regulator Genes
Gene Expression
Chromosome Segregation
Heterochromatin

Biomimetic Approach Toward Enterocin and Deoxyenterocin

Rizzo, A., Mayer, R. J. & Trauner, D., Feb 1 2019, In : Journal of Organic Chemistry. 84, 3, p. 1162-1175 14 p.

Research output: Contribution to journalArticle

Biomimetics
Biological Products
Polyketides
Ketones
Discrete Fourier transforms