Faculty of Arts and Science

Research Output 1960 2017

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Review article
2017

Are all repeats created equal? Understanding DNA repeats at an individual level

Yang, J. & Li, F. Feb 1 2017 In : Current Genetics. 63, 1, p. 57-63 7 p.

Research output: Contribution to journalReview article

DNA
Centromere
Epigenomics
Chromatin
Genome

Are stereotypes accurate? A perspective from the cognitive science of concepts

Bian, L. & Cimpian, A. 2017 In : Behavioral and Brain Sciences. 40, e3

Research output: Contribution to journalReview article

stereotype
Stereotypes
Cognitive Science
measurement method
distinction

Biophysically motivated regulatory network inference: Progress and prospects

Äijö, T. & Bonneau, R. Jan 1 2017 In : Human Heredity. 81, 2, p. 62-77 16 p.

Research output: Contribution to journalReview article

Technology
Chromatin
Research Design
Learning
Genome

Coherent variability: The self with significant others in memory and context

Andersen, S. M., Tuskeviciute, R. & Przybylinski, E. 2017 In : Social Cognition. 35, 2, p. 107-123 17 p.

Research output: Contribution to journalReview article

Cues
Transference (Psychology)

From attachment to independence: stress hormone control of ecologically relevant emergence of infants’ responses to threat

Santiago, A., Aoki, C. & Sullivan, R. M. Apr 1 2017 In : Current Opinion in Behavioral Sciences. 14, p. 78-85 8 p.

Research output: Contribution to journalReview article

Corticosterone
Amygdala
Fear
Hormones
Learning

Impaired Tuning of Neural Ensembles and the Pathophysiology of Schizophrenia: A Translational and Computational Neuroscience Perspective

Krystal, J. H., Anticevic, A., Yang, G. J., Dragoi, G., Driesen, N. R., Wang, X. J. & Murray, J. D. May 15 2017 In : Biological Psychiatry. 81, 10, p. 874-885 12 p.

Research output: Contribution to journalReview article

Neurosciences
Schizophrenia
Excitatory Amino Acid Antagonists
N-Methyl-D-Aspartate Receptors
Short-Term Memory

Lay listeners can evaluate the pitch accuracy of operatic voices

Larrouy-Maestri, P., Morsomme, D., Magis, D. & Poeppel, D. Apr 1 2017 In : Music Perception. 34, 4, p. 489-495 7 p.

Research output: Contribution to journalReview article

Expertise
Acoustics
Melody
Singers
Music training

Neuroscience Needs Behavior: Correcting a Reductionist Bias

Krakauer, J. W., Ghazanfar, A. A., Gomez-Marin, A., MacIver, M. A. & Poeppel, D. Feb 8 2017 In : Neuron. 93, 3, p. 480-490 11 p.

Research output: Contribution to journalReview article

Neurosciences
Brain
Connectome
Optogenetics
Causality

Parsing learning in networks using brain–machine interfaces

Orsborn, A. L. & Pesaran, B. Oct 1 2017 In : Current Opinion in Neurobiology. 46, p. 76-83 8 p.

Research output: Contribution to journalReview article

Brain-Computer Interfaces
Learning
Brain
Paralysis

Quantifying protein (dis)order: A study of bacteria, yeast, and mammalian cells maps the melting behavior of cellular proteins

Vogel, C. Feb 24 2017 In : Science. 355, 6327, p. 794-795 2 p.

Research output: Contribution to journalReview article

Proteins

Reactions of Allylmagnesium Halides with Carbonyl Compounds: Reactivity, Structure, and Mechanism

Bartolo, N. D., Read, J. A., Valentín, E. M. & Woerpel, K. A. Aug 1 2017 In : Synthesis (Germany). 49, 15, p. 3237-3246 10 p.

Research output: Contribution to journalReview article

Carbonyl compounds
Aldehydes
Ketones
Agglomeration
X rays

Removal of oxidatively generated DNA damage by overlapping repair pathways

Shafirovich, V. & Geacintov, N. E. Jun 1 2017 In : Free Radical Biology and Medicine. 107, p. 53-61 9 p.

Research output: Contribution to journalReview article

DNA Repair
DNA Damage
Repair
Nitroimidazoles
Guanine

Repair-Resistant DNA Lesions

Geacintov, N. E. & Broyde, S. Aug 21 2017 In : Chemical Research in Toxicology. 30, 8, p. 1517-1548 32 p.

Research output: Contribution to journalReview article

DNA Repair
DNA
Repair
Nucleotides
Substrates

Sleep regulation of the distribution of cortical firing rates

Levenstein, D., Watson, B. O., Rinzel, J. & Buzsáki, G. Jun 1 2017 In : Current Opinion in Neurobiology. 44, p. 34-42 9 p.

Research output: Contribution to journalReview article

Sleep
Neurons
Brain

Stress and the trade-off between hippocampal and striatal memory

Goldfarb, E. V. & Phelps, E. A. Apr 1 2017 In : Current Opinion in Behavioral Sciences. 14, p. 47-53 7 p.

Research output: Contribution to journalReview article

Corpus Striatum
Psychopathology

The development of motor behavior

Adolph, K. E. & Franchak, J. M. Jan 1 2017 In : Wiley Interdisciplinary Reviews: Cognitive Science. 8, 1-2, e1430

Research output: Contribution to journalReview article

Infant Behavior
Motor Skills
Locomotion
Posture

The intersection between ocular and manual motor control: Eye-hand coordination in acquired brain injury

Rizzo, J. R., Hosseini, M., Wong, E. A., Mackey, W. E., Fung, J. K., Ahdoot, E., Rucker, J. C., Raghavan, P., Landy, M. S. & Hudson, T. E. Jun 1 2017 In : Frontiers in Neurology. 8, JUN, 227

Research output: Contribution to journalReview article

Brain Injuries
Chronic Disease
Biological Markers
Neurophysiology
Acute Disease

The lung mycobiome in the next-generation sequencing era

Tipton, L., Ghedin, E. & Morris, A. Apr 3 2017 In : Virulence. 8, 3, p. 334-341 8 p.

Research output: Contribution to journalReview article

Lung
Fungi
Respiratory Tract Diseases

The role of 'omics' in the quest to eliminate human filariasis

Lustigman, S., Grote, A. & Ghedin, E. Apr 20 2017 In : PLoS Neglected Tropical Diseases. 11, 4, e0005464

Research output: Contribution to journalReview article

Filariasis

Timing temporal transitions during brain development

Rossi, A. M., Fernandes, V. M. & Desplan, C. Feb 1 2017 In : Current Opinion in Neurobiology. 42, p. 84-92 9 p.

Research output: Contribution to journalReview article

Brain
Neural Stem Cells
Invertebrates
Nervous System
Cues

Working class conservatism: a system justification perspective

Jost, J. T. Dec 1 2017 In : Current Opinion in Psychology. 18, p. 73-78 6 p.

Research output: Contribution to journalReview article

Vulnerable Populations
Politics
Social Psychology
Systems Theory
Social Sciences
2016

3D DNA crystals and nanotechnology

Paukstelis, P. J. & Seeman, N. C. Aug 1 2016 In : Crystals. 6, 8, 97

Research output: Contribution to journalReview article

DNA
Crystals
Nanotechnology
Molecules
Molecular recognition

A Case for Distributed Control of Local Stem Cell Behavior in Plants

Rahni, R., Efroni, I. & Birnbaum, K. D. Sep 26 2016 In : Developmental Cell. 38, 6, p. 635-642 8 p.

Research output: Contribution to journalReview article

Stem Cells
Meristem

Agent-based modeling: Case study in cleavage furrow models

Mogilner, A. & Manhart, A. Nov 7 2016 In : Molecular Biology of the Cell. 27, 22, p. 3379-3384 6 p.

Research output: Contribution to journalReview article

Cell Biology
History
Recognition (Psychology)

Beyond the turing test

Marcus, G., Rossi, F. & Veloso, M. 2016 In : AI Magazine. 37, 1, p. 3-4 2 p.

Research output: Contribution to journalReview article

Brain structure and dynamics across scales: In search of rules

Wang, X. J. & Kennedy, H. Apr 1 2016 In : Current Opinion in Neurobiology. 37, p. 92-98 7 p.

Research output: Contribution to journalReview article

Brain
Fathers

Charting the landscape of priority problems in psychiatry, part 1: Classification and diagnosis

Stephan, K. E., Bach, D. R., Fletcher, P. C., Flint, J., Frank, M. J., Friston, K. J., Heinz, A., Huys, Q. J. M., Owen, M. J., Binder, E. B., Dayan, P., Johnstone, E. C., Meyer-Lindenberg, A., Montague, P. R., Schnyder, U., Wang, X. J. & Breakspear, M. Jan 1 2016 In : The Lancet Psychiatry. 3, 1, p. 77-83 7 p.

Research output: Contribution to journalReview article

Psychiatry
Genetic Research
Mathematics
Mental Disorders
Decision Making

Charting the landscape of priority problems in psychiatry, part 2: Pathogenesis and aetiology

Stephan, K. E., Binder, E. B., Breakspear, M., Dayan, P., Johnstone, E. C., Meyer-Lindenberg, A., Schnyder, U., Wang, X. J., Bach, D. R., Fletcher, P. C., Flint, J., Frank, M. J., Heinz, A., Huys, Q. J. M., Montague, P. R., Owen, M. J. & Friston, K. J. Jan 1 2016 In : The Lancet Psychiatry. 3, 1, p. 84-90 7 p.

Research output: Contribution to journalReview article

Psychiatry
Mental Disorders

How many ways are there to make a root?

Birnbaum, K. D. Dec 1 2016 In : Current Opinion in Plant Biology. 34, p. 61-67 7 p.

Research output: Contribution to journalReview article

cytokinins
ontogeny
auxins
embryogenesis

Multi-level regulation of cellular glycosylation: from genes to transcript to enzyme to structure

Neelamegham, S. & Mahal, L. K. Oct 1 2016 In : Current Opinion in Structural Biology. 40, p. 145-152 8 p.

Research output: Contribution to journalReview article

Glycosylation
Polysaccharides
Enzymes
Genes
Proteins

Network inference from multimodal data: A review of approaches from infectious disease transmission

Ray, B., Ghedin, E. & Chunara, R. Dec 1 2016 In : Journal of Biomedical Informatics. 64, p. 44-54 11 p.

Research output: Contribution to journalReview article

Infectious Disease Transmission
Electric power transmission networks
Metagenomics
Pandemics
Neurosciences

Nitrate Transport, Sensing, and Responses in Plants

O'Brien, J. A. A., Vega, A., Bouguyon, E., Krouk, G., Gojon, A., Coruzzi, G. & Gutiérrez, R. A. A. 2016 In : Molecular Plant. 9, 6, p. 837-856 20 p.

Research output: Contribution to journalReview article

Nitrates
Food
Imino Acids
Plant Physiological Phenomena
Plant Development

Opportunities and challenges in modeling human brain disorders in transgenic primates

Jennings, C. G., Landman, R., Zhou, Y., Sharma, J., Hyman, J., Movshon, J. A., Qiu, Z., Roberts, A. C., Roe, A. W., Wang, X., Zhou, H., Wang, L., Zhang, F., Desimone, R. & Feng, G. Sep 1 2016 In : Nature Neuroscience. 19, 9, p. 1123-1130 8 p.

Research output: Contribution to journalReview article

Brain Diseases
Primates
Brain
Primate Diseases
Clustered Regularly Interspaced Short Palindromic Repeats

Programmed cell death acts at different stages of Drosophila neurodevelopment to shape the central nervous system

Pinto-Teixeira, F., Konstantinides, N. & Desplan, C. Aug 1 2016 In : FEBS Letters. p. 2435-2453 19 p.

Research output: Contribution to journalReview article

Drosophila
Cell Death
Central Nervous System
Nervous System
Cell Lineage

Soft Crystals in Flatland: Unraveling Epitaxial Growth

Ward, M. D. Jul 26 2016 In : ACS Nano. 10, 7, p. 6424-6428 5 p.

Research output: Contribution to journalReview article

Substrates
Epitaxial growth
Molecules
Thin films
Crystals

Three challenges for connecting model to mechanism in decision-making

Churchland, A. K. & Kiani, R. Oct 1 2016 In : Current Opinion in Behavioral Sciences. 11, p. 74-80 7 p.

Research output: Contribution to journalReview article

Decision Making
Neurons
Datasets

Transcriptional Control of Developmental Cell Behaviors

Bernadskaya, Y. & Christiaen, L. Oct 6 2016 In : Annual Review of Cell and Developmental Biology. 32, p. 77-101 25 p.

Research output: Contribution to journalReview article

Gene Regulatory Networks
Cues
Cell-Matrix Junctions
Developmental Genes
Cell Shape

Using neuroscience to help understand fear and anxiety: A two-system framework

LeDoux, J. E. & Pine, D. S. Nov 1 2016 In : American Journal of Psychiatry. 173, 11, p. 1083-1093 11 p.

Research output: Contribution to journalReview article

Neurosciences
Fear
Anxiety
Brain
Anxiety Disorders
2015

Comprehensive imaging of cortical networks

Peron, S., Chen, T. W. & Svoboda, K. Jun 1 2015 In : Current Opinion in Neurobiology. 32, p. 115-123 9 p.

Research output: Contribution to journalReview article

Neurons
Brain
Optical Imaging
Temporal Lobe
Calcium

Human V4 and ventral occipital retinotopic maps

Winawer, J. & Witthoft, N. Apr 15 2015 In : Visual Neuroscience. 32, e020

Research output: Contribution to journalReview article

Occipital Lobe
Macaca
Neuroimaging
History
Brain

Sensitive Periods in Affective Development: Nonlinear Maturation of Fear Learning

Hartley, C. A. & Lee, F. S. Jan 1 2015 In : Neuropsychopharmacology. 40, 1, p. 50-60 11 p.

Research output: Contribution to journalReview article

Fear
Learning
Brain
Psychological Extinction

The neuroscience of adolescent decision-making

Hartley, C. A. & Somerville, L. H. Oct 1 2015 In : Current Opinion in Behavioral Sciences. 5, p. 108-115 8 p.

Research output: Contribution to journalReview article

Neurosciences
Decision Making
Uncertainty
Corpus Striatum
Reward
2014

Refining and expanding the proposal of an inherence heuristic in human understanding

Cimpian, A. & Salomon, E. Oct 12 2014 In : Behavioral and Brain Sciences. 37, 5, p. 506-527 22 p.

Research output: Contribution to journalReview article

heuristics
Heuristics
explanation
observation
appeal
2013

Are mantle plumes periodic?

Rampino, M. R. & Prokoph, A. Mar 19 2013 In : Eos. 94, 12, p. 113-114 2 p.

Research output: Contribution to journalReview article

mantle plume
2010

Keeping in touch with contact inhibition of locomotion

Mayor, R. & Carmona-Fontaine, C. Jun 2010 In : Trends in Cell Biology. 20, 6, p. 319-328 10 p.

Research output: Contribution to journalReview article

Contact Inhibition
Locomotion
rho GTP-Binding Proteins
Monomeric GTP-Binding Proteins
Cell Movement
2005

Genetic network during neural crest induction: From cell specification to cell survival

Steventon, B., Carmona-Fontaine, C. & Mayor, R. Dec 2005 In : Seminars in Cell and Developmental Biology. 16, 6, p. 647-654 8 p.

Research output: Contribution to journalReview article

Neural Crest
Cell Survival
Transcription Factors
2002

Phylogenetic classification of Ericaceae: Molecular and morphological evidence

Tuckerman, M. E., Marx, D. & Parrinello, M. 2002 In : Botanical Review. 68, 3, p. 335-423 89 p.

Research output: Contribution to journalReview article

Ericaceae
phylogenetics
taxonomy
new taxon
chloroplast