Faculty of Arts and Science

Research Output 1960 2018

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Review article
2018

Astrocyte glycogen and lactate: New insights into learning and memory mechanisms

Alberini, C. M., Cruz, E., Descalzi, G., Bessières, B. & Gao, V. Jun 1 2018 In : GLIA. 66, 6, p. 1244-1262 19 p.

Research output: Contribution to journalReview article

Glycogen
Astrocytes
Lactic Acid
Learning
Glycogenolysis

Ideological asymmetries in conformity, desire for shared reality, and the spread of misinformation

Jost, J. T., van der Linden, S., Panagopoulos, C. & Hardin, C. D. Oct 1 2018 In : Current Opinion in Psychology. 23, p. 77-83 7 p.

Research output: Contribution to journalReview article

Social Support
Uncertainty
Cues
Motivation
Consensus

Intracellular Fluid Mechanics: Coupling Cytoplasmic Flow with Active Cytoskeletal Gel

Mogilner, A. & Manhart, A. Jan 5 2018 In : Annual Review of Fluid Mechanics. 50, p. 347-370 24 p.

Research output: Contribution to journalReview article

fluid mechanics
gels
cytology
continuum mechanics
organelles

Malaria parasite evolution in a test tube

Carlton, J. M. Jan 12 2018 In : Science. 359, 6372, p. 159-160 2 p.

Research output: Contribution to journalReview article

Biological Evolution
host-parasite interaction
Host-Parasite Interactions
disease transmission
Plasmodium

NLGN1 and NLGN2 in the prefrontal cortex: their role in memory consolidation and strengthening

Katzman, A. & Alberini, C. M. Feb 1 2018 In : Current Opinion in Neurobiology. 48, p. 122-130 9 p.

Research output: Contribution to journalReview article

Prefrontal Cortex
Cognition
Animal Models
neuroligin 1
Memory Consolidation

Psychology, Science, and Knowledge Construction: Broadening Perspectives from the Replication Crisis

Shrout, P. E. & Rodgers, J. L. Jan 4 2018 In : Annual Review of Psychology. 69, p. 487-510 24 p.

Research output: Contribution to journalReview article

Disclosure
Psychology
Research
Meta-Analysis
Research Personnel

Shared reality in interpersonal relationships

Andersen, S. M. & Przybylinski, E. Oct 1 2018 In : Current Opinion in Psychology. 23, p. 42-46 5 p.

Research output: Contribution to journalReview article

Cues
Veins
Transference (Psychology)
Research
Self-Control

Single-cell RNA sequencing to explore immune cell heterogeneity

Papalexi, E. & Satija, R. Jan 1 2018 In : Nature Reviews Immunology. 18, 1, p. 35-45 11 p.

Research output: Contribution to journalReview article

RNA Sequence Analysis
Immune System
Cell Lineage
Systems Analysis
Epigenomics

Surviving threats: Neural circuit and computational implications of a new taxonomy of defensive behaviour

Ledoux, J. & Daw, N. D. Apr 17 2018 In : Nature Reviews Neuroscience. 19, 5, p. 269-282 14 p.

Research output: Contribution to journalReview article

Habits
Reflex
Mammals
Psychology
Research

The Brain Compass: A Perspective on How Self-Motion Updates the Head Direction Cell Attractor

Laurens, J. & Angelaki, D. E. Jan 17 2018 In : Neuron. 97, 2, p. 275-289 15 p.

Research output: Contribution to journalReview article

Head
Cues
Brain
Gravitation
Darkness

The Partisan Brain: An Identity-Based Model of Political Belief

Van Bavel, J. J. & Pereira, A. Mar 1 2018 In : Trends in Cognitive Sciences. 22, 3, p. 213-224 12 p.

Research output: Contribution to journalReview article

Democracy
Mental Processes
Automatic Data Processing
Brain
Research

The subjective experience of emotion: a fearful view

LeDoux, J. E. & Hofmann, S. G. Feb 1 2018 In : Current Opinion in Behavioral Sciences. 19, p. 67-72 6 p.

Research output: Contribution to journalReview article

Emotions
Expressed Emotion
Brain
Self Report
Research
2017

Are all repeats created equal? Understanding DNA repeats at an individual level

Yang, J. & Li, F. Feb 1 2017 In : Current Genetics. 63, 1, p. 57-63 7 p.

Research output: Contribution to journalReview article

Centromere
Epigenomics
Chromatin
DNA
Genome

Are stereotypes accurate? A perspective from the cognitive science of concepts

Bian, L. & Cimpian, A. 2017 In : Behavioral and Brain Sciences. 40, e3

Research output: Contribution to journalReview article

Cognitive Science
stereotype
social judgement
psycholinguistics
science

Biophysically motivated regulatory network inference: Progress and prospects

Äijö, T. & Bonneau, R. Jan 1 2017 In : Human Heredity. 81, 2, p. 62-77 16 p.

Research output: Contribution to journalReview article

Technology
Chromatin
Research Design
Learning
Genome

Coherent variability: The self with significant others in memory and context

Andersen, S. M., Tuskeviciute, R. & Przybylinski, E. 2017 In : Social Cognition. 35, 2, p. 107-123 17 p.

Research output: Contribution to journalReview article

Cues
Research
Transference (Psychology)

Computational psychiatry and the challenge of schizophrenia

Krystal, J. H., Murray, J. D., Chekroud, A. M., Corlett, P. R., Yang, G., Wang, X. J. & Anticevic, A. 2017 In : Schizophrenia Bulletin. 43, 3, p. 473-475 3 p.

Research output: Contribution to journalReview article

Psychiatry
Schizophrenia
Learning
Research
Datasets

Crystal Growth with Macromolecular Additives

Shtukenberg, A. G., Ward, M. D. & Kahr, B. Dec 27 2017 In : Chemical Reviews. 117, 24, p. 14042-14090 49 p.

Research output: Contribution to journalReview article

Program debugging
Biomineralization
Crystallization kinetics
Growth kinetics
Macromolecules

Distributed Visual-Vestibular Processing in the Cerebral Cortex of Man and Macaque

Smith, A. T., Greenlee, M. W., DeAngelis, G. C. & Angelaki, D. E. Jan 1 2017 In : Multisensory Research. 30, 2, p. 91-120 30 p.

Research output: Contribution to journalReview article

Macaca
Cerebral Cortex
Brain
Motion Perception
Photic Stimulation

DNA nanotechnology

Seeman, N. C. & Sleiman, H. F. Nov 8 2017 In : Nature Reviews Materials. 3, 17068

Research output: Contribution to journalReview article

Nanotechnology
DNA
Nanostructures
Biophysics
Nanoscience

Ferroptosis: A Regulated Cell Death Nexus Linking Metabolism, Redox Biology, and Disease

Stockwell, B. R. , Friedmann Angeli, J. P. , Bayir, H. , Bush, A. I. , Conrad, M. , Dixon, S. J. , Fulda, S. , Gascón, S. , Hatzios, S. K. , Kagan, V. E. , Noel, K. , Jiang, X. , Linkermann, A. , Murphy, M. E. , Overholtzer, M. , Oyagi, A. , Pagnussat, G. C. , Park, J. , Ran, Q. , Rosenfeld, C. S. & 7 others Salnikow, K., Tang, D., Torti, F. M., Torti, S. V., Toyokuni, S., Woerpel, K. A. & Zhang, D. D. Oct 5 2017 In : Cell. 171, 2, p. 273-285 13 p.

Research output: Contribution to journalReview article

Cell death
Metabolism
Oxidation-Reduction
Cell Death
Unsaturated Fatty Acids

From attachment to independence: stress hormone control of ecologically relevant emergence of infants’ responses to threat

Santiago, A., Aoki, C. & Sullivan, R. M. Apr 1 2017 In : Current Opinion in Behavioral Sciences. 14, p. 78-85 8 p.

Research output: Contribution to journalReview article

Corticosterone
Amygdala
Fear
Hormones
Learning

Generation and Evolution of Neural Cell Types and Circuits: Insights from the Drosophila Visual System

Perry, M., Konstantinides, N., Pinto-Teixeira, F. & Desplan, C. Nov 27 2017 In : Annual Review of Genetics. 51, p. 501-577 77 p.

Research output: Contribution to journalReview article

Drosophila
Neurons
Diptera
Brain
Insects

Getting the flu: 5 key facts about influenza virus evolution

Johnson, K. E. E., Song, T., Greenbaum, B. & Ghedin, E. Aug 1 2017 In : PLoS Pathogens. 13, 8, e1006450

Research output: Contribution to journalReview article

Orthomyxoviridae

Impaired Tuning of Neural Ensembles and the Pathophysiology of Schizophrenia: A Translational and Computational Neuroscience Perspective

Krystal, J. H., Anticevic, A., Yang, G. J., Dragoi, G., Driesen, N. R., Wang, X. J. & Murray, J. D. May 15 2017 In : Biological Psychiatry. 81, 10, p. 874-885 12 p.

Research output: Contribution to journalReview article

Neurosciences
Schizophrenia
Excitatory Amino Acid Antagonists
N-Methyl-D-Aspartate Receptors
Short-Term Memory

Inference in the Brain: Statistics Flowing in Redundant Population Codes

Pitkow, X. & Angelaki, D. E. Jun 7 2017 In : Neuron. 94, 5, p. 943-953 11 p.

Research output: Contribution to journalReview article

Nerve Net
Neurological Models
Nonlinear Dynamics
Decision Making
Brain

Lay listeners can evaluate the pitch accuracy of operatic voices

Larrouy-Maestri, P., Morsomme, D., Magis, D. & Poeppel, D. Apr 1 2017 In : Music Perception. 34, 4, p. 489-495 7 p.

Research output: Contribution to journalReview article

Listeners
Lay
Music
Acoustics
Singers

Maximum entropy models as a tool for building precise neural controls

Savin, C. & Tkačik, G. Oct 1 2017 In : Current Opinion in Neurobiology. 46, p. 120-126 7 p.

Research output: Contribution to journalReview article

Entropy
Population Characteristics
Population

Memory Takes Time

Kukushkin, N. V. & Carew, T. J. Jul 19 2017 In : Neuron. 95, 2, p. 259-279 21 p.

Research output: Contribution to journalReview article

Social Adjustment
Neuronal Plasticity
Aptitude
Fourier Analysis
Nervous System

Neuroscience Needs Behavior: Correcting a Reductionist Bias

Krakauer, J. W., Ghazanfar, A. A., Gomez-Marin, A., MacIver, M. A. & Poeppel, D. Feb 8 2017 In : Neuron. 93, 3, p. 480-490 11 p.

Research output: Contribution to journalReview article

Neurosciences
Connectome
Optogenetics
Brain
Causality

Parsing learning in networks using brain–machine interfaces

Orsborn, A. L. & Pesaran, B. Oct 1 2017 In : Current Opinion in Neurobiology. 46, p. 76-83 8 p.

Research output: Contribution to journalReview article

Brain-Computer Interfaces
Learning
Brain
Paralysis

Quantifying protein (dis)order: A study of bacteria, yeast, and mammalian cells maps the melting behavior of cellular proteins

Vogel, C. Feb 24 2017 In : Science. 355, 6327, p. 794-795 2 p.

Research output: Contribution to journalReview article

cells and cell components
Freezing
yeast
melting
Yeasts

Reactions of Allylmagnesium Halides with Carbonyl Compounds: Reactivity, Structure, and Mechanism

Bartolo, N. D., Read, J. A., Valentín, E. M. & Woerpel, K. A. Aug 1 2017 In : Synthesis (Germany). 49, 15, p. 3237-3246 10 p.

Research output: Contribution to journalReview article

Carbonyl compounds
Aldehydes
Ketones
Agglomeration
X rays

Removal of oxidatively generated DNA damage by overlapping repair pathways

Shafirovich, V. & Geacintov, N. E. Jun 1 2017 In : Free Radical Biology and Medicine. 107, p. 53-61 9 p.

Research output: Contribution to journalReview article

DNA Repair
DNA Damage
Repair
Nitroimidazoles
DNA

Repair-Resistant DNA Lesions

Geacintov, N. E. & Broyde, S. Aug 21 2017 In : Chemical Research in Toxicology. 30, 8, p. 1517-1548 32 p.

Research output: Contribution to journalReview article

DNA Repair
Repair
DNA
Nucleotides
Drug Design

Retinal perception and ecological significance of color vision in insects

Lebhardt, F. & Desplan, C. Dec 1 2017 In : Current Opinion in Insect Science. 24, p. 75-83 9 p.

Research output: Contribution to journalReview article

color vision
wavelengths
eyes
insect
opsin

Sleep regulation of the distribution of cortical firing rates

Levenstein, D., Watson, B. O., Rinzel, J. & Buzsáki, G. Jun 1 2017 In : Current Opinion in Neurobiology. 44, p. 34-42 9 p.

Research output: Contribution to journalReview article

Sleep
Neurons
Brain

Specificity and Speed: Tethered Photopharmacology

Leippe, P., Koehler Leman, J. & Trauner, D. Oct 3 2017 In : Biochemistry. 56, 39, p. 5214-5220 7 p.

Research output: Contribution to journalReview article

Gene therapy
Pharmacology
Genetic Therapy
Biological systems
Optogenetics

Stress and the trade-off between hippocampal and striatal memory

Goldfarb, E. V. & Phelps, E. A. Apr 1 2017 In : Current Opinion in Behavioral Sciences. 14, p. 47-53 7 p.

Research output: Contribution to journalReview article

Corpus Striatum
Psychopathology
Maintenance
Research Personnel

The development of motor behavior

Adolph, K. E. & Franchak, J. M. Jan 1 2017 In : Wiley Interdisciplinary Reviews: Cognitive Science. 8, 1-2, e1430

Research output: Contribution to journalReview article

Infant Behavior
Motor Skills
Locomotion
Posture
Research

The ebb and flow of experience determines the temporal structure of memory

Clewett, D. & Davachi, L. Oct 1 2017 In : Current Opinion in Behavioral Sciences. 17, p. 186-193 8 p.

Research output: Contribution to journalReview article

Episodic Memory
Cues

The intersection between ocular and manual motor control: Eye-hand coordination in acquired brain injury

Rizzo, J. R., Hosseini, M., Wong, E. A., Mackey, W. E., Fung, J. K., Ahdoot, E., Rucker, J. C., Raghavan, P., Landy, M. S. & Hudson, T. E. Jun 1 2017 In : Frontiers in Neurology. 8, JUN, 227

Research output: Contribution to journalReview article

Brain Injuries
Hand
Chronic Disease
Biomarkers
Neurophysiology

The lung mycobiome in the next-generation sequencing era

Tipton, L., Ghedin, E. & Morris, A. Apr 3 2017 In : Virulence. 8, 3, p. 334-341 8 p.

Research output: Contribution to journalReview article

Lung
Fungi
Respiratory Tract Diseases
Names
Mycobiome

The role of 'omics' in the quest to eliminate human filariasis

Lustigman, S., Grote, A. & Ghedin, E. Apr 20 2017 In : PLoS Neglected Tropical Diseases. 11, 4, e0005464

Research output: Contribution to journalReview article

Timing temporal transitions during brain development

Rossi, A. M., Fernandes, V. M. & Desplan, C. Feb 1 2017 In : Current Opinion in Neurobiology. 42, p. 84-92 9 p.

Research output: Contribution to journalReview article

Brain
Aptitude
Neural Stem Cells
Invertebrates
Nervous System

Working class conservatism: a system justification perspective

Jost, J. T. Dec 1 2017 In : Current Opinion in Psychology. 18, p. 73-78 6 p.

Research output: Contribution to journalReview article

Vulnerable Populations
Politics
Social Psychology
Social Sciences
Uncertainty
2016

3D DNA crystals and nanotechnology

Paukstelis, P. J. & Seeman, N. C. Aug 1 2016 In : Crystals. 6, 8, 97

Research output: Contribution to journalReview article

nanotechnology
Nanotechnology
DNA
deoxyribonucleic acid
Crystals

A Case for Distributed Control of Local Stem Cell Behavior in Plants

Rahni, R., Efroni, I. & Birnbaum, K. D. Sep 26 2016 In : Developmental Cell. 38, 6, p. 635-642 8 p.

Research output: Contribution to journalReview article

Stem Cells
Meristem
Mechanics

Accurate Calculation of Electric Fields Inside Enzymes

Wang, X., He, X. & Zhang, J. Z. H. 2016 In : Methods in enzymology. 578, p. 45-72 28 p.

Research output: Contribution to journalReview article

Electric fields
Enzymes
Catalytic Domain
Proteins
Electric Power Supplies

Agent-based modeling: Case study in cleavage furrow models

Mogilner, A. & Manhart, A. Nov 7 2016 In : Molecular Biology of the Cell. 27, 22, p. 3379-3384 6 p.

Research output: Contribution to journalReview article

Systems Analysis
Cell Biology
History
Recognition (Psychology)