Oral and Maxillofacial Surgery

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2005

Segmental duplications and copy-number variation in the human genome

Sharp, A. J., Locke, D. P., McGrath, S. D., Cheng, Z., Bailey, J. A., Vallente, R. U., Pertz, L. M., Clark, R. A., Schwartz, S., Segraves, R., Oseroff, V. V., Albertson, D. G., Pinkel, D. & Eichler, E. E., Jul 2005, In : American Journal of Human Genetics. 77, 1, p. 78-88 11 p.

Research output: Contribution to journalArticle

The BAC resource: tools for array CGH and FISH.

Nowak, N. J., Snijders, A. M., Conroy, J. M. & Albertson, D. G., Aug 2005, In : Current protocols in human genetics / editorial board, Jonathan L. Haines ... [et al.]. Chapter 4, p. Unit 4.13

Research output: Contribution to journalArticle

Therapy-induced malignant neoplasms in Nf1 mutant mice

Chao, R. C., Pyzel, U., Fridlyand, J., Kuo, Y. M., Teel, L., Haaga, J., Borowsky, A., Horvai, A., Kogan, S. C., Bonifas, J., Huey, B., Jacks, T. E., Albertson, D. G. & Shannon, K. M., Oct 2005, In : Cancer Cell. 8, 4, p. 337-348 12 p.

Research output: Contribution to journalArticle

Tongue and tonsil carcinoma: Increasing trends in the U.S. population ages 20-44 years

Shiboski, C. H., Schmidt, B. L. & Jordan, R. C. K., May 1 2005, In : Cancer. 103, 9, p. 1843-1849 7 p.

Research output: Contribution to journalArticle

Variations in human HM74 (GPR109B) and HM74A (GPR109A) niacin receptors

Zellner, C., Pullinger, C. R., Aouizerat, B. E., Frost, P. H., Kwok, P. Y., Malloy, M. J. & Kane, J. P., 2005, In : Human Mutation. 25, 1, p. 18-21 4 p.

Research output: Contribution to journalArticle

β-6 Integrin, tenascin-C, and MMP-1 expression in salivary gland neoplasms

Westernoff, T. H., Jordan, R. C. K., Regezi, J. A., Ramos, D. M. & Schmidt, B. L., Feb 2005, In : Oral Oncology. 41, 2, p. 170-174 5 p.

Research output: Contribution to journalArticle

2004

Allelic loss at the GPx-1 locus in cancer of the head and neck

Hu, Y. J., Dolan, M. E., Bae, R., Yee, H., Roy, M., Glickman, R., Kiremidjian-Schumacher, L. & Diamond, A. M., Nov 2004, In : Biological Trace Element Research. 101, 2, p. 97-106 10 p.

Research output: Contribution to journalArticle

Apoptotic effects of LPS on fibroblasts are indirectly mediated through TNFR1

Alikhani, M., Alikhani, Z. & Graves, D. T., Sep 2004, In : Journal of dental research. 83, 9, p. 671-676 6 p.

Research output: Contribution to journalArticle

A set of BAC clones spanning the human genome

Krzywinski, M., Bosdet, I., Smailus, D., Chiu, R., Mathewson, C., Wye, N., Barber, S., Brown-John, M., Chan, S., Chand, S., Cloutier, A., Girn, N., Lee, D., Masson, A., Mayo, M., Olson, T., Pandoh, P., Prabhu, A. L., Schoenmakers, E., Tsai, M. & 9 others, Albertson, D., Lam, W., Choy, C. O., Osoegawa, K., Zhao, S., de Jong, P. J., Schein, J., Jones, S. & Marra, M. A., 2004, In : Nucleic acids research. 32, 12, p. 3651-3660 10 p.

Research output: Contribution to journalArticle

A tiling resolution DNA microarray with complete coverage of the human genome

Ishkanian, A. S., Malloff, C. A., Watson, S. K., DeLeeuw, R. J., Chi, B., Coe, B. P., Snijders, A., Albertson, D. G., Pinkel, D., Marra, M. A., Ling, V., MacAulay, C. & Lam, W. L., Mar 2004, In : Nature Genetics. 36, 3, p. 299-303 5 p.

Research output: Contribution to journalArticle

BAC microarray analysis of 15q11-q13 rearrangements and the impact of segmental duplications

Locke, D. P., Segraves, R., Nicholls, R. D., Schwartz, S., Pinkel, D., Albertson, D. G. & Eichler, E. E., Mar 2004, In : Journal of Medical Genetics. 41, 3, p. 175-182 8 p.

Research output: Contribution to journalArticle

Open Access

BAC microarray-based comparative genomic hybridization.

Snijders, A. M., Segraves, R., Blackwood, S., Pinkel, D. & Albertson, D. G., 2004, In : Methods in molecular biology (Clifton, N.J.). 256, p. 39-56 18 p.

Research output: Contribution to journalArticle

Chromosomal instability and lack of cyclin E regulation in hCdc4 mutant human breast cancer cells

Willmarth, N. E., Albertson, D. G. & Ethier, S. P., Jul 6 2004, In : Breast Cancer Research. 6, 5, R531.

Research output: Contribution to journalArticle

Open Access

Crosstalk of Hypoxia-Mediated Signaling Pathways in Upregulating Plasminogen Activator Inhibitor-1 Expression in Keloid Fibroblasts

Zhang, Q., Wu, Y., Chau, C. H., Ann, D. K., Bertolami, C. N. & Le, A. D., Apr 2004, In : Journal of Cellular Physiology. 199, 1, p. 89-97 9 p.

Research output: Contribution to journalArticle

Elevated Vascular Endothelial Growth Factor in Keloids: Relevance to Tissue Fibrosis

Le, A. D., Zhang, Q., Wu, Y., Messadi, D. V., Akhondzadeh, A., Nguyen, A. L., Aghaloo, T. L., Kelly, A. P. & Bertolami, C. N., 2004, In : Cells Tissues Organs. 176, 1-3, p. 87-94 8 p.

Research output: Contribution to journalArticle

Evaluation of Genetic Patterns in Different Tumor Areas of Intermediate-Grade Prostatic Adenocarcinomas by High-Resolution Genomic Array Analysis

Van Dekken, H., Paris, P. L., Albertson, D. G., Alers, J. C., Andaya, A., Kowbel, D., Van Der Kwast, T. H., Pinkel, D., Schröder, F. H., Vissers, K. J., Wildhagen, M. F. & Collins, C., Mar 2004, In : Genes Chromosomes and Cancer. 39, 3, p. 249-256 8 p.

Research output: Contribution to journalArticle

Evaluation of pain in patients with oral squamous cell carcinoma

Connelly, S. T. & Schmidt, B. L., Nov 2004, In : Journal of Pain. 5, 9, p. 505-510 6 p.

Research output: Contribution to journalArticle

Genomic alterations in primary gastric adenocarcinomas correlate with clinicopathological characteristics and survival

Weiss, M. M., Kuipers, E. J., Postma, C., Snijders, A. M., Pinkel, D., Meuwissen, S. G. M., Albertson, D. & Meijer, G. A., 2004, In : Cellular Oncology. 26, 5-6, p. 307-317 11 p.

Research output: Contribution to journalArticle

Genomic and Expression Analysis of the 8p11-12 Amplicon in Human Breast Cancer Cell Lines

Ray, M. E., Yang, Z. Q., Albertson, D., Kleer, C. G., Washburn, J. G., Macoska, J. A. & Ethier, S. P., Jan 1 2004, In : Cancer Research. 64, 1, p. 40-47 8 p.

Research output: Contribution to journalArticle

Genomic organization of the 8p11∼p12 amplicon in three breast cancer cell lines

Yang, Z. Q., Albertson, D. & Ethier, S. P., Nov 2004, In : Cancer Genetics and Cytogenetics. 155, 1, p. 57-62 6 p.

Research output: Contribution to journalArticle

Hidden Markov models approach to the analysis of array CGH data

Fridlyand, J., Snijders, A. M., Pinkel, D., Albertson, D. G. & Jain, A. N., Jul 2004, In : Journal of Multivariate Analysis. 90, 1 SPEC. ISS., p. 132-153 22 p.

Research output: Contribution to journalArticle

Integration of high-resolution array comparative genomic hybridization analysis of chromosome 16q with expression array data refines common regions of loss at 16q23-qter and identifies underlying candidate tumor suppressor genes in prostate cancer

Vivienne Watson, J. E., Doggett, N. A., Albertson, D. G., Andaya, A., Chinnaiyan, A., Van Dekken, H., Ginzinger, D., Haqq, C., James, K., Kamkar, S., Kowbel, D., Pinkel, D., Schmitt, L., Simko, J. P., Volik, S., Weinberg, V. K., Paris, P. L. & Collins, C., Apr 22 2004, In : Oncogene. 23, 19, p. 3487-3494 8 p.

Research output: Contribution to journalArticle

Management of TMJ hypermobility and hypomobility

Karlis, V., Pavone, A. & Glickman, R., Oct 2004, In : Selected Readings in Oral and Maxillofacial. 12, 5

Research output: Contribution to journalArticle

Neurosensory changes after liquid nitrogen cryotherapy

Schmidt, B. L. & Pogrel, M. A., Oct 2004, In : Journal of Oral and Maxillofacial Surgery. 62, 10, p. 1183-1187 5 p.

Research output: Contribution to journalArticle

Newly mapped gene for thoracic aortic aneurysm and dissection

Wung, S. F. & Aouizerat, B. E., 2004, In : Journal of Cardiovascular Nursing. 19, 6, p. 409-416 8 p.

Research output: Contribution to journalArticle

Novel genetic markers for structural coronary artery disease, myocardial infarction, and familial combined hyperlipidemia: Candidate and genome scans of functional SNPs

Kane, J. P., Aouizerat, B. E., Luke, M. M., Shiffman, D., Iakoubova, O., Liu, D., Rowland, C. M., Catanese, J. J., Leong, D. U., Lau, K. F., Louie, J. Z., Tong, C. H., McAllister, L. B., Dabby, L. F., Ports, T. A., Michaels, A. D., Zellner, C., Pullinger, C. R., Malloy, M. J. & Devlin, J. J., May 1 2004, In : International Congress Series. 1262, C, p. 309-312 4 p.

Research output: Contribution to journalArticle

Overexpression of matrix metalloproteinase-1 and -9 mRNA is associated with progression of oral dysplasia to cancer

Jordan, R. C. K., Macabeo-Ong, M., Shiboski, C. H., Dekker, N., Ginzinger, D. G., Wong, D. T. W. & Schmidt, B. L., Oct 1 2004, In : Clinical Cancer Research. 10, 19, p. 6460-6465 6 p.

Research output: Contribution to journalArticle

Pathology quiz case 2

Perlman, J. S., Pletcher, S. D., Schmidt, B. L. & Eisele, D. W., Jun 2004, In : Archives of Otolaryngology - Head and Neck Surgery. 130, 6, p. 791+793-794

Research output: Contribution to journalArticle

Prader-Willi syndrome resulting from an unbalanced translocation: Characterization by array comparative genomic hybridization

Klein, O. D., Cotter, P. D., Albertson, D. G., Pinkel, D., Tidyman, W. E., Moore, M. W. & Rauen, K. A., Jun 2004, In : Clinical Genetics. 65, 6, p. 477-482 6 p.

Research output: Contribution to journalArticle

pRb inactivation in mammary cells reveals common mechanisms for tumor initiation and progression in divergent epithelia

Simin, K., Wu, H., Lu, L., Pinkel, D., Albertson, D., Cardiff, R. D. & Van Dyke, T., 2004, In : PLoS biology. 2, 2

Research output: Contribution to journalArticle

Reconstruction of extensive maxillary defects using zygomaticus implants

Schmidt, B. L., Pogrel, M. A., Young, C. W. & Sharma, A., Sep 2004, In : Journal of Oral and Maxillofacial Surgery. 62, SUPPL. 2, p. 82-89 8 p.

Research output: Contribution to journalArticle

Severe corneal edema after temporomandibular joint reconstruction: Report of a case

Fleisher, K. E., Hirsch, D. L., Pahlavi, I. A. & Glickman, R., Oct 2004, In : Journal of Oral and Maxillofacial Surgery. 62, 10, p. 1324-1326 3 p.

Research output: Contribution to journalArticle

TNF-α in vivo stimulates apoptosis in fibroblasts through caspase-8 activation and modulates the expression of pro-apoptotic genes

Alikhani, M., Alikhani, Z., Raptis, M. & Graves, D. T., Dec 2004, In : Journal of Cellular Physiology. 201, 3, p. 341-348 8 p.

Research output: Contribution to journalArticle

Tobacco smoking history and presentation of oral squamous cell carcinoma

Schmidt, B. L., Dierks, E. J., Homer, L. & Potter, B., Sep 2004, In : Journal of Oral and Maxillofacial Surgery. 62, 9, p. 1055-1058 4 p.

Research output: Contribution to journalArticle

Whole genome scanning identifies genotypes associated with recurrence and metastasis in prostate tumors

Paris, P. L., Andaya, A., Fridlyand, J., Jain, A. N., Weinberg, V., Kowbel, D., Brebner, J. H., Simko, J., Watson, J. E. V., Volik, S., Albertson, D. G., Pinkel, D., Alers, J. C., Van Der Kwast, T. H., Vissers, K. J., Schroder, F. H., Wildhagen, M. F., Febbo, P. G., Chinnaiyan, A. M., Pienta, K. J. & 4 others, Carroll, P. R., Rubin, M. A., Collins, C. & Van Dekken, H., Jul 1 2004, In : Human Molecular Genetics. 13, 13, p. 1303-1313 11 p.

Research output: Contribution to journalArticle

2003

Adaptations in nucleus accumbens circuitry during opioid withdrawal associated with persistence of noxious stimulus-induced antinociception in the rat

Schmidt, B. L., Tambeli, C. H., Levine, J. D. & Gear, R. W., Apr 2003, In : Journal of Pain. 4, 3, p. 141-147 7 p.

Research output: Contribution to journalArticle

Apolipoprotein a-v: A determinant of plasma triglyceride levels

Aouizerat, B. & Kane, JP., 2003, In : Atherosclerosis. http://www.athero.org/commentaries/comm210.asp.

Research output: Contribution to journalArticle

Array-based comparative genomic hybridization for genome-wide screening of DNA copy number in bladder tumors

Veltman, J. A., Fridlyand, J., Pejavar, S., Olshen, A. B., Korkola, J. E., DeVries, S., Carroll, P., Kuo, W. L., Pinkel, D., Albertson, D., Cordon-Cardo, C., Jain, A. N. & Waldman, F. M., Jun 1 2003, In : Cancer Research. 63, 11, p. 2872-2880 9 p.

Research output: Contribution to journalArticle

Co-editors

Pogrel, M. A. (ed.) & Schmidt, B. (ed.), 2003, In : Oral and Maxillofacial Surgery Clinics of North America. 15, 4

Research output: Contribution to journalArticle

Cryosurgical management of the odontogenic keratocyst

Schmidt, B., 2003, In : Oral and Maxillofacial Surgery Clinics of North America. 15, p. 393-405

Research output: Contribution to journalArticle

Current status and future prospects of array-based comparative genomic hybridisation

Snijders, A. M., Pinkel, D. & Albertson, D. G., Apr 2003, In : Briefings in Functional Genomics and Proteomics. 2, 1, p. 37-45 9 p.

Research output: Contribution to journalArticle

De-differentiation of odontogenic keratocyst epithelium after cyst decompression

Schmidt, B., 2003, In : Journal of Oral and Maxillofacial Surgery. 61, p. 683-4 (Discusion).

Research output: Contribution to journalArticle

Determinants of BRAF mutations in primary melanomas

Maldonado, J. L., Fridlyand, J., Patel, H., Jain, A. N., Busam, K., Kageshita, T., Ono, T., Albertson, D. G., Pinkel, D. & Bastian, B. C., Dec 17 2003, In : Journal of the National Cancer Institute. 95, 24, p. 1878-1880 3 p.

Research output: Contribution to journalArticle

Open Access

Genetic analysis of a polymorphism in the human apoA-V gene: Effect on plasma lipids

Aouizerat, B. E., Kulkarni, M., Heilbron, D., Drown, D., Raskin, S., Pullinger, C. R., Malloy, M. J. & Kane, J. P., Jun 2003, In : Journal of Lipid Research. 44, 6, p. 1167-1173 7 p.

Research output: Contribution to journalArticle

Genome-wide-array-based comparative genomic hybridization reveals genetic homogeneity and frequent copy number increases encompassing CCNE1 in Fallopian tube carcinoma

Snijders, A. M., Nowee, M. E., Fridlyand, J., Piek, J. M. J., Dorsman, J. C., Jain, A. N., Pinkel, D., Van Diest, P. J., Verheijen, R. H. M. & Albertson, D. G., Jul 3 2003, In : Oncogene. 22, 27, p. 4281-4286 6 p.

Research output: Contribution to journalArticle

Genome-wide array CGH analysis of murine neuroblastoma reveals distinct genomic aberrations which parallel those in human tumors

Hackett, C. S., Hodgson, J. G., Law, M. E., Fridlyand, J., Osoegawa, K., De Jong, P. J., Nowak, N. J., Pinkel, D., Albertson, D. G., Jain, A., Jenkins, R., Gray, J. W. & Weiss, W. A., Sep 1 2003, In : Cancer Research. 63, 17, p. 5266-5273 8 p.

Research output: Contribution to journalArticle

Genome wide array comparative genomic hybridisation analysis of premalignant lesions of the stomach

Weiss, M. M., Kuipers, E. J., Postma, C., Snijders, A. M., Stolte, M., Vieth, M., Pinkel, D., Meuwissen, S. G. M., Albertson, D. & Meijer, G. A., Oct 2003, In : Journal of Clinical Pathology - Molecular Pathology. 56, 5, p. 293-298 6 p.

Research output: Contribution to journalArticle

Genomic profiling of gastric cancer predicts lymph node status and survival

Weiss, M. M., Kuipers, E. J., Postma, C., Snijders, A. M., Siccama, I., Pinkel, D., Westerga, J., Meuwissen, S. G. M., Albertson, D. G. & Meijer, G. A., Mar 27 2003, In : Oncogene. 22, 12, p. 1872-1879 8 p.

Research output: Contribution to journalArticle