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Gloria Coruzzi

Carroll and Milton Petrie Professor of Biology

    1978 …2020

    Research output per year

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    Research Output

    OrthologID: Automation of genome-scale ortholog identification within a parsimony framework

    Chiu, J. C., Lee, E. K., Egan, M. G., Sarkar, I. N., Coruzzi, G. M. & DeSalle, R., Mar 15 2006, In : Bioinformatics. 22, 6, p. 699-707 9 p.

    Research output: Contribution to journalArticle

    OutPredict: multiple datasets can improve prediction of expression and inference of causality

    Cirrone, J., Brooks, M. D., Bonneau, R., Coruzzi, G. M. & Shasha, D. E., Dec 1 2020, In : Scientific reports. 10, 1, 6804.

    Research output: Contribution to journalArticle

    Open Access

    Overexpression of cytosolic glutamine synthetase. Relation to nitrogen, light, and photorespiration

    Oliveira, I. C., Brears, T., Knight, T. J., Clark, A. & Coruzzi, G. M., 2002, In : Plant physiology. 129, 3, p. 1170-1180 11 p.

    Research output: Contribution to journalArticle

    Overexpression of the ASN1 gene enhances nitrogen status in seeds of Arabidopsis

    Lam, H. M., Wong, P., Chan, H. K., Yam, K. M., Chen, L., Chow, C. M. & Coruzzi, G. M., Jun 1 2003, In : Plant physiology. 132, 2, p. 926-935 10 p.

    Research output: Contribution to journalArticle

    Photorespiration and light act in concert to regulate the expression of the nuclear gene for chloroplast glutamine synthetase.

    Edwards, J. W. & Coruzzi, G. M., Feb 1989, In : The Plant cell. 1, 2, p. 241-248 8 p.

    Research output: Contribution to journalArticle

    Open Access

    Phylogenetic and expression analysis of the glutamate-receptor-like gene family in Arabidopsis thaliana

    Chiu, J. C., Brenner, E. D., DeSalle, R., Nitabach, M. N., Holmes, T. C. & Coruzzi, G. M., 2002, In : Molecular Biology and Evolution. 19, 7, p. 1066-1082 17 p.

    Research output: Contribution to journalArticle

    Open Access

    Physiology and metabolism: Two old grannies catch fire in the new millennium

    Browse, J. & Coruzzi, G., 2000, In : Current Opinion in Plant Biology. 3, 3, p. 179-181 3 p.

    Research output: Contribution to journalEditorial

    Plant Systems Biology

    Raikhel, N. V. & Coruzzi, G. M., Jun 1 2003, In : Plant physiology. 132, 2, 1 p.

    Research output: Contribution to journalEditorial

    Plasticity Regulators Modulate Specific Root Traits in Discrete Nitrogen Environments

    Gifford, M. L., Banta, J. A., Katari, M. S., Hulsmans, J., Chen, L., Ristova, D., Tranchina, D., Purugganan, M. D., Coruzzi, G. M. & Birnbaum, K. D., Sep 2013, In : PLoS genetics. 9, 9, e1003760.

    Research output: Contribution to journalArticle

    Predictive network modeling of the high-resolution dynamic plant transcriptome in response to nitrate

    Krouk, G., Mirowski, P., LeCun, Y., Shasha, D. E. & Coruzzi, G. M., Dec 23 2010, In : Genome biology. 11, 12, R123.

    Research output: Contribution to journalArticle

    Qualitative network models and genome-wide expression data define carbon/ nitrogen-responsive molecular machines in Arabidopsis

    Gutiérrez, R. A., Lejay, L. V., Dean, A., Chiaromonte, F., Shasha, D. E. & Coruzzi, G. M., Jan 11 2007, In : Genome biology. 8, 1, R7.

    Research output: Contribution to journalArticle

    Reciprocal regulation of distinct asparagine synthetase genes by light and metabolites in Arabidopsis thaliana

    Lam, H. M., Hsieh, M. H. & Coruzzi, G., Nov 1998, In : Plant Journal. 16, 3, p. 345-353 9 p.

    Research output: Contribution to journalArticle

    RootScape: A landmark-based system for rapid screening of root architecture in Arabidopsis

    Ristova, D., Rosas, U., Krouk, G., Ruffel, S., Birnbaum, K. D. & Coruzzi, G. M., 2013, In : Plant physiology. 161, 3, p. 1086-1096 11 p.

    Research output: Contribution to journalArticle

    SDG8-mediated histone methylation and RNA processing function in the response to nitrate signaling

    Li, Y., Brooks, M., Yeoh-Wang, J., McCoy, R. M., Rock, T. M., Pasquino, A., Moon, C. I., Patrick, R. M., Tanurdzic, M., Ruffel, S., Widhalm, J. R., McCombie, W. R. & Coruzzi, G. M., Jan 2020, In : Plant physiology. 182, 1, p. 215-227 13 p.

    Research output: Contribution to journalArticle

    Open Access

    Structural Analysis of Nuclear Genes Coding for the Precursor to the Small Subunit of Wheat Ribulose-1,5-Bisphosphate Carboxylase

    Broglie, R., Coruzzi, G., Lamppa, G., Keith, B. & Chua, N. H., Mar 1983, In : Bio/Technology. 1, 1, p. 55-61 7 p.

    Research output: Contribution to journalArticle

    Sungear: Interactive visualization and functional analysis of genomic datasets

    Poultney, C. S., Gutiérrez, R. A., Katari, M. S., Gifford, M. L., Paley, W. B., Coruzzi, G. M. & Shasha, D. E., 2007, In : Bioinformatics. 23, 2, p. 259-261 3 p.

    Research output: Contribution to journalArticle

    Systems approach identifies an organic nitrogen-responsive gene network that is regulated by the master clock control gene CCA1

    Gutiérrez, R. A., Stokes, T. L., Thum, K., Xu, X., Obertello, M., Katari, M. S., Tanurdzic, M., Dean, A., Nero, D. C., McClung, C. R. & Coruzzi, G. M., Mar 25 2008, In : Proceedings of the National Academy of Sciences of the United States of America. 105, 12, p. 4939-4944 6 p.

    Research output: Contribution to journalArticle

    Systems Biology: Principles and Applications in Plant Research

    Coruzzi, G. M., Burga, A. R., Katari, M. S. & Gutiérrez, R. A., Aug 18 2009, Plant Systems Biology. Blackwell Publishing Ltd, Vol. 35. p. 1-40 40 p.

    Research output: Chapter in Book/Report/Conference proceedingChapter

    Systems biology for the virtual plant

    Gutiérrez, R. A., Shasha, D. E. & Coruzzi, G. M., 2005, In : Plant physiology. 138, 2, p. 550-554 5 p.

    Research output: Contribution to journalReview article

    TARGET: A transient transformation system for genome-wide transcription factor target discovery

    Bargmann, B. O. R., Marshall-Colon, A., Efroni, I., Ruffel, S., Birnbaum, K. D., Coruzzi, G. M. & Krouk, G., May 2013, In : Molecular Plant. 6, 3, p. 978-980 3 p.

    Research output: Contribution to journalLetter

    Temporal transcriptional logic of dynamic regulatory networks underlying nitrogen signaling and use in plants

    Varala, K., Marshall-Colón, A., Cirrone, J., Brooks, M. D., Pasquino, A. V., Léran, S., Mittal, S., Rock, T. M., Edwards, M. B., Kim, G. J., Ruffel, S., Richard McCombie, W., Shasha, D. & Coruzzi, G. M., Jun 19 2018, In : Proceedings of the National Academy of Sciences of the United States of America. 115, 25, p. 6494-6499 6 p.

    Research output: Contribution to journalArticle

    The histone methyltransferase SDG8 mediates the epigenetic modification of light and carbon responsive genes in plants

    Li, Y., Mukherjee, I., Thum, K. E., Tanurdzic, M., Katari, M. S., Obertello, M., Edwards, M. B., McCombie, W. R., Martienssen, R. A. & Coruzzi, G. M., Apr 19 2015, In : Genome biology. 16, 1, 79.

    Research output: Contribution to journalArticle

    The identity of plant glutamate receptors [3]

    Lacombe, B., Becker, D., Hedrich, R., DeSalle, R., Hollmann, M., Kwak, J. M., Schroeder, J. I., Le Novère, N., Nam, H. G., Spalding, E. P., Tester, M., Turano, F. J., Chiu, J. & Coruzzi, G., May 25 2001, In : Science. 292, 5521, p. 1486-1487 2 p.

    Research output: Contribution to journalLetter

    The impact of outgroup choice and missing data on major seed plant phylogenetics using genome-wide EST data

    de la Torre-Bárcena, J. E., Kolokotronis, S. O., Lee, E. K., Stevenson, D. W., Brenner, E. D., Katari, M. S., Coruzzi, G. M. & DeSalle, R., Jun 2 2009, In : PloS one. 4, 6, e5764.

    Research output: Contribution to journalArticle

    The molecular-genetics of nitrogen assimilation into amino acids in higher plants

    Lam, H. M., Coschigano, K. T., Oliveira, I. C., Melo-Oliveira, R. & Coruzzi, G. M., 1996, In : Annual Review of Plant Physiology and Plant Molecular Biology. 47, 1, p. 569-593 25 p.

    Research output: Contribution to journalArticle

    Tissue-specific and light-regulated expression of a pea nuclear gene encoding the small subunit of ribulose-1,5-bisphosphate carboxylase.

    Coruzzi, G., Broglie, R., Edwards, C. & Chua, N. H., Aug 1984, In : The EMBO journal. 3, 8, p. 1671-1679 9 p.

    Research output: Contribution to journalArticle

    Transfer RNA genes in the cap-oxil region of yeast mitochondrial DNA

    Berlani, R. E., Bonitz, S. G., Coruzzi, G., Nobrega, M. & Tzagoloff, A., Nov 11 1980, In : Nucleic acids research. 8, 21, p. 5017-5030 14 p.

    Research output: Contribution to journalArticle

    Transient genome-wide interactions of the master transcription factor NLP7 initiate a rapid nitrogen-response cascade

    Alvarez, J. M., Schinke, A. L., Brooks, M. D., Pasquino, A., Leonelli, L., Varala, K., Safi, A., Krouk, G., Krapp, A. & Coruzzi, G. M., Dec 1 2020, In : Nature communications. 11, 1, 1157.

    Research output: Contribution to journalArticle

    Open Access

    Use of Arabidopsis mutants and genes to study amide amino acid biosynthesis

    Lam, H. M., Coschigano, K., Schultz, C., Melo-Oliveira, R., Tjaden, G., Oliveira, I., Ngai, N., Hsieh, M. H. & Coruzzi, G., Jul 1995, In : Plant Cell. 7, 7, p. 887-898 12 p.

    Research output: Contribution to journalReview article

    Open Access

    Use of the UGA terminator as a tryptophan codon in yeast mitochondria

    Macino, G., Coruzzi, G., Nobrega, F. G., Li, M. & Tzagoloff, A., 1979, In : Proceedings of the National Academy of Sciences of the United States of America. 76, 8, p. 3784-3785 2 p.

    Research output: Contribution to journalArticle

    Using combinatorial design to study regulation by multiple input signals. A tool for parsimony in the post-genomics era

    Shasha, D. E., Kouranov, A. Y., Lejay, L. V., Chou, M. F. & Coruzzi, G. M., 2001, In : Plant physiology. 127, 4, p. 1590-1594 5 p.

    Research output: Contribution to journalArticle

    Using combinatorial design to study regulation by multiple input signals. A tool for parsimony in the post-genomics era

    Shasha, D. E., Kouranov, A. Y., Lejay, L. V., Chou, M. F. & Coruzzi, G. M., 2001, In : Plant Physiology. 127, 4, p. 1590-1594 5 p.

    Research output: Contribution to journalArticle

    Using phylogenomic patterns and gene ontology to identify proteins of importance in plant evolution

    Cibrian-Jaramillo, A., De La Torre-Bárcenaf, J. E., Lee, E. K., Katari, M. S., Little, D. P., Stevenson, D. W., Martienssen, R., Coruzzi, G. M. & Desalle, R., 2010, In : Genome biology and evolution. 2, 1, p. 225-239 15 p.

    Research output: Contribution to journalArticle

    VirtualPlant: A software platform to support systems biology research

    Katari, M. S., Nowicki, S. D., Aceituno, F. F., Nero, D., Kelfer, J., Thompson, L. P., Cabello, J. M., Davidson, R. S., Goldberg, A. P., Shasha, D. E., Coruzzi, G. M. & Gutiérrez, R. A., Feb 2010, In : Plant physiology. 152, 2, p. 500-515 16 p.

    Research output: Contribution to journalArticle

    Water impacts nutrient dose responses genome-wide to affect crop production

    Swift, J., Adame, M., Tranchina, D., Henry, A. & Coruzzi, G. M., Dec 1 2019, In : Nature communications. 10, 1, 1374.

    Research output: Contribution to journalArticle

    Open Access

    WRKY1Mediates transcriptional regulation of light and nitrogen signaling pathways

    Heerah, S., Katari, M., Penjor, R., Coruzzi, G. & Marshall-Colon, A., Nov 2019, In : Plant physiology. 181, 3, p. 1371-1388 18 p.

    Research output: Contribution to journalArticle

    Open Access

    μChIP-seq for genome-wide mapping of in vivo TF-DNA interactions in Arabidopsis root protoplasts

    Para, A., Li, Y. & Coruzzi, G. M., 2018, Methods in Molecular Biology. Humana Press Inc., p. 249-261 13 p. (Methods in Molecular Biology; vol. 1761).

    Research output: Chapter in Book/Report/Conference proceedingChapter