TY - JOUR
T1 - A direct computational assessment of vinculin–actin unbinding kinetics reveals catch-bonding behavior
AU - Peña Ccoa, Willmor J.
AU - Mukadum, Fatemah
AU - Ramon, Aubin
AU - Stirnemann, Guillaume
AU - Hocky, Glen M.
N1 - Publisher Copyright:
Copyright © 2025 the Author(s).
PY - 2025/5/27
Y1 - 2025/5/27
N2 - Vinculin forms a catch bond with the cytoskeletal polymer actin, displaying an increased bond lifetime upon force application. Notably, this behavior depends on the direction of the applied force, which has significant implications for cellular mechanotransduction. In this work, we present a comprehensive molecular dynamics simulation study, employing enhanced sampling techniques to investigate the thermodynamic, kinetic, and mechanistic aspects of this phenomenon at physiologically relevant forces. We dissect a catch bond mechanism in which force shifts vinculin between either a weakly or strongly bound state. Our results demonstrate that models for these states have unbinding times consistent with those from single-molecule studies, and suggest that both have some intrinsic catch-bonding behavior. We provide atomistic insight into this behavior, and show how a directional pulling force can promote the strong or weak state. Crucially, our strategy can be extended to measure the difficult-to-capture effects of small mechanical forces on biomolecular systems in general, and those involved in mechanotransduction more specifically.
AB - Vinculin forms a catch bond with the cytoskeletal polymer actin, displaying an increased bond lifetime upon force application. Notably, this behavior depends on the direction of the applied force, which has significant implications for cellular mechanotransduction. In this work, we present a comprehensive molecular dynamics simulation study, employing enhanced sampling techniques to investigate the thermodynamic, kinetic, and mechanistic aspects of this phenomenon at physiologically relevant forces. We dissect a catch bond mechanism in which force shifts vinculin between either a weakly or strongly bound state. Our results demonstrate that models for these states have unbinding times consistent with those from single-molecule studies, and suggest that both have some intrinsic catch-bonding behavior. We provide atomistic insight into this behavior, and show how a directional pulling force can promote the strong or weak state. Crucially, our strategy can be extended to measure the difficult-to-capture effects of small mechanical forces on biomolecular systems in general, and those involved in mechanotransduction more specifically.
KW - actin
KW - catch bond
KW - molecular dynamics
KW - rate constants
KW - vinculin
UR - http://www.scopus.com/inward/record.url?scp=105006455514&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=105006455514&partnerID=8YFLogxK
U2 - 10.1073/pnas.2425982122
DO - 10.1073/pnas.2425982122
M3 - Article
C2 - 40397673
AN - SCOPUS:105006455514
SN - 0027-8424
VL - 122
JO - Proceedings of the National Academy of Sciences of the United States of America
JF - Proceedings of the National Academy of Sciences of the United States of America
IS - 21
M1 - e2425982122
ER -