TY - JOUR
T1 - A Spatiotemporal Approach to Predicting Glaucoma Progression Using a CT-HMM
AU - Nagesh, Supriya
AU - Moreno, Alexander
AU - Ishikawa, Hiroshi
AU - Wollstein, Gadi
AU - Schuman, Joel S.
AU - Rehg, James M.
N1 - Funding Information:
The research reported in this paper was supported in part by grant R01EY013178 awarded by the National Institutes of Health. We thank Yu-Ying Liu for useful discussions about the experiments and the implementation of the average RNFL model from prior work.
Publisher Copyright:
© 2019 S. Nagesh, A. Moreno, H. Ishikawa, G. Wollstein, J.S. Schuman & J.M. Rehg.
PY - 2019
Y1 - 2019
N2 - Glaucoma is the second leading global cause of blindness and its effects are irreversible, making early intervention crucial. The identification of glaucoma progression is therefore a challenging and important task. In this work, we model and predict longitudinal glaucoma measurements using an interpretable, discrete state space model. Two common glaucoma biomarkers are the retinal nerve fibre layer (RNFL) thickness and the visual field index (VFI). Prior works have frequently used a scalar representation for RNFL, such as the average RNFL thickness, thereby discarding potentially-useful spatial information. We present a technique for incorporating spatiotemporal RNFL thickness measurements obtained from a sequence of OCT images into a longitudinal progression model. While these images capture the details of RNFL thickness, representing them for use in a longitudinal model poses two challenges: First, spatial changes in RNFL thickness must be encoded and organized into a temporal sequence in order to enable state space modeling. Second, a predictive model for forecasting the pattern of changes over time must be developed. We address these challenges through a novel approach to spatiotemporal progression analysis. We jointly model the change in RNFL with VFI using a CT-HMM and predict future measurements. We achieve a decrease in mean absolute error of 74% for spatial RNFL thickness encoding in comparison to prior work using the average RNFL thickness. This work will be useful for accurately predicting the spatial location and intensity of tissue degeneration. Appropriate intervention based on more accurate prediction can potentially help to improve the clinical care of glaucoma.
AB - Glaucoma is the second leading global cause of blindness and its effects are irreversible, making early intervention crucial. The identification of glaucoma progression is therefore a challenging and important task. In this work, we model and predict longitudinal glaucoma measurements using an interpretable, discrete state space model. Two common glaucoma biomarkers are the retinal nerve fibre layer (RNFL) thickness and the visual field index (VFI). Prior works have frequently used a scalar representation for RNFL, such as the average RNFL thickness, thereby discarding potentially-useful spatial information. We present a technique for incorporating spatiotemporal RNFL thickness measurements obtained from a sequence of OCT images into a longitudinal progression model. While these images capture the details of RNFL thickness, representing them for use in a longitudinal model poses two challenges: First, spatial changes in RNFL thickness must be encoded and organized into a temporal sequence in order to enable state space modeling. Second, a predictive model for forecasting the pattern of changes over time must be developed. We address these challenges through a novel approach to spatiotemporal progression analysis. We jointly model the change in RNFL with VFI using a CT-HMM and predict future measurements. We achieve a decrease in mean absolute error of 74% for spatial RNFL thickness encoding in comparison to prior work using the average RNFL thickness. This work will be useful for accurately predicting the spatial location and intensity of tissue degeneration. Appropriate intervention based on more accurate prediction can potentially help to improve the clinical care of glaucoma.
UR - http://www.scopus.com/inward/record.url?scp=85140466855&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=85140466855&partnerID=8YFLogxK
M3 - Conference article
AN - SCOPUS:85140466855
SN - 2640-3498
VL - 106
SP - 140
EP - 159
JO - Proceedings of Machine Learning Research
JF - Proceedings of Machine Learning Research
T2 - 4th Machine Learning for Healthcare Conference, MLHC 2019
Y2 - 9 August 2019 through 10 August 2019
ER -