TY - GEN
T1 - Adaptive multiresolution techniques for subcellular protein location classification
AU - Srinivasa, Gowri
AU - Merryman, Thomas
AU - Chebira, Amina
AU - Kovačević, Jelena
AU - Mintos, Alexia
PY - 2006
Y1 - 2006
N2 - We propose an adaptive multiresolution (MR) approach for classification of fluorescence microscopy images of subcellular protein locations, providing biologically relevant information. These images have highly localized features both in space and frequency which naturally leads us to MR tools. Moreover, as the goal of the classification system is to distinguish between various protein classes, we aim for features adapted to individual proteins. These two requirements further lead us to adaptive MR tools. We start with a simple classification system consisting of Haralick texture feature computation followed by a maximum-likelihood classifier, and demonstrate that, by adding an MR block in front, we are able to raise the average classification accuracy by roughly 10%. We conclude that selecting features in MR subspaces allows us to custom-build discriminative feature sets for fluorescence microscopy images of protein subcellular location images.
AB - We propose an adaptive multiresolution (MR) approach for classification of fluorescence microscopy images of subcellular protein locations, providing biologically relevant information. These images have highly localized features both in space and frequency which naturally leads us to MR tools. Moreover, as the goal of the classification system is to distinguish between various protein classes, we aim for features adapted to individual proteins. These two requirements further lead us to adaptive MR tools. We start with a simple classification system consisting of Haralick texture feature computation followed by a maximum-likelihood classifier, and demonstrate that, by adding an MR block in front, we are able to raise the average classification accuracy by roughly 10%. We conclude that selecting features in MR subspaces allows us to custom-build discriminative feature sets for fluorescence microscopy images of protein subcellular location images.
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M3 - Conference contribution
AN - SCOPUS:33947684906
SN - 142440469X
SN - 9781424404698
T3 - ICASSP, IEEE International Conference on Acoustics, Speech and Signal Processing - Proceedings
SP - V1177-V1180
BT - 2006 IEEE International Conference on Acoustics, Speech, and Signal Processing - Proceedings
T2 - 2006 IEEE International Conference on Acoustics, Speech and Signal Processing, ICASSP 2006
Y2 - 14 May 2006 through 19 May 2006
ER -