BioNetBuilder: Automatic integration of biological networks

Iliana Avila-Campillo; John Lin; David J. Reiss; Richard Bonneau

doi:10.1093/bioinformatics/btl604

BioNetBuilder: Automatic integration of biological networks

Iliana Avila-Campillo, John Lin, David J. Reiss, Richard Bonneau

Research output: Contribution to journal › Article › peer-review

Abstract

BioNetBuilder is an open-source client-server Cytoscape plugin that offers a user-friendly interface to create biological networks integrated from several databases. Users can create networks for ∼1500 organisms, including common model organisms and human. Currently supported databases include: DIP, BIND, Prolinks, KEGG, HPRD, The BioGrid and GO, among others. The BioNetBuilder plugin client is available as a Java Webstart, providing a platform-independent network interface to these public databases.

Original language	English (US)
Pages (from-to)	392-393
Number of pages	2
Journal	Bioinformatics
Volume	23
Issue number	3
DOIs	https://doi.org/10.1093/bioinformatics/btl604
State	Published - Feb 1 2007

ASJC Scopus subject areas

Statistics and Probability
Biochemistry
Molecular Biology
Computer Science Applications
Computational Theory and Mathematics
Computational Mathematics

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10.1093/bioinformatics/btl604

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abstract = "BioNetBuilder is an open-source client-server Cytoscape plugin that offers a user-friendly interface to create biological networks integrated from several databases. Users can create networks for ∼1500 organisms, including common model organisms and human. Currently supported databases include: DIP, BIND, Prolinks, KEGG, HPRD, The BioGrid and GO, among others. The BioNetBuilder plugin client is available as a Java Webstart, providing a platform-independent network interface to these public databases.",

author = "Iliana Avila-Campillo and John Lin and Reiss, {David J.} and Richard Bonneau",

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AU - Bonneau, Richard

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BioNetBuilder: Automatic integration of biological networks

Abstract

ASJC Scopus subject areas

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