BioNetBuilder: Automatic integration of biological networks

Iliana Avila-Campillo, John Lin, David J. Reiss, Richard Bonneau

Research output: Contribution to journalArticle

Abstract

BioNetBuilder is an open-source client-server Cytoscape plugin that offers a user-friendly interface to create biological networks integrated from several databases. Users can create networks for ∼1500 organisms, including common model organisms and human. Currently supported databases include: DIP, BIND, Prolinks, KEGG, HPRD, The BioGrid and GO, among others. The BioNetBuilder plugin client is available as a Java Webstart, providing a platform-independent network interface to these public databases.

Original languageEnglish (US)
Pages (from-to)392-393
Number of pages2
JournalBioinformatics
Volume23
Issue number3
DOIs
StatePublished - Feb 1 2007

ASJC Scopus subject areas

  • Statistics and Probability
  • Biochemistry
  • Molecular Biology
  • Computer Science Applications
  • Computational Theory and Mathematics
  • Computational Mathematics

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