TY - JOUR
T1 - Generating Cocrystal Polymorphs with Information Entropy Driven by Molecular Dynamics-Based Enhanced Sampling
AU - Song, Hongxing
AU - Vogt-Maranto, Leslie
AU - Wiscons, Ren
AU - Matzger, Adam J.
AU - Tuckerman, Mark E.
N1 - Funding Information:
The authors thank Nicolas Vigilante for preliminary work generating cocrystal structures. R.W. and A.J.M. acknowledge Sabrina Archer for assistance with crystal growth. L.V.-M. acknowledges support from the Army Research Office (ARO), Grant W911NF-19-1-0095 P0002 and W911NF-13-0387. M.E.T. acknowledges support from the National Science Foundation (NSF), Grants CHE-1565980 and CHE-1955381.
Publisher Copyright:
© 2020 American Chemical Society.
PY - 2020/11/19
Y1 - 2020/11/19
N2 - Predicting structures of organic molecular cocrystals is a challenging task when considering the immense number of possible intermolecular orientations. Use of the Shannon information entropy, constructed from an intermolecular orientational spatial distribution function, to drive a search for crystal structures via enhanced molecular dynamics can be an efficient way to map out a landscape of putative polymorphs. Here, the Shannon entropy is used to generate a set of collective variables for differentiating polymorphs of a 1:1 cocrystal of resorcinol and urea. We show that driven adiabatic free energy dynamics, a particular enhanced-sampling approach, combined with these entropy variables, can transform the stable phase into alternate polymorphs. Density functional theory calculations confirm that a structure obtained from the enhanced molecular dynamics is stable at pressures above 1 GPa. We thus show that enhanced sampling should be considered an integral component of crystal structure searching protocols for systems with multiple independent molecules.
AB - Predicting structures of organic molecular cocrystals is a challenging task when considering the immense number of possible intermolecular orientations. Use of the Shannon information entropy, constructed from an intermolecular orientational spatial distribution function, to drive a search for crystal structures via enhanced molecular dynamics can be an efficient way to map out a landscape of putative polymorphs. Here, the Shannon entropy is used to generate a set of collective variables for differentiating polymorphs of a 1:1 cocrystal of resorcinol and urea. We show that driven adiabatic free energy dynamics, a particular enhanced-sampling approach, combined with these entropy variables, can transform the stable phase into alternate polymorphs. Density functional theory calculations confirm that a structure obtained from the enhanced molecular dynamics is stable at pressures above 1 GPa. We thus show that enhanced sampling should be considered an integral component of crystal structure searching protocols for systems with multiple independent molecules.
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U2 - 10.1021/acs.jpclett.0c02647
DO - 10.1021/acs.jpclett.0c02647
M3 - Article
C2 - 33141590
AN - SCOPUS:85096457095
SN - 1948-7185
VL - 11
SP - 9751
EP - 9758
JO - Journal of Physical Chemistry Letters
JF - Journal of Physical Chemistry Letters
IS - 22
ER -