TY - JOUR
T1 - Molecular crowding shapes gene expression in synthetic cellular nanosystems
AU - Tan, Cheemeng
AU - Saurabh, Saumya
AU - Bruchez, Marcel P.
AU - Schwartz, Russell
AU - Leduc, Philip
N1 - Funding Information:
The authors thank members of the LeDuc and Schwartz laboratories, the group of the Center for Mechanical Technology and Automation at University of Aveiro in Portugal, Dr. Shuqiang Huang, Dr. Gang Bao, and Dr. Lingchong You for discussions and comments, and R. Murphy, A. Mitchell, B. Armitage, T. Lee, F. Lanni and the Molecular Biosensor and Imaging Center for providing access to equipment. This work was partially supported by a Lane Postdoctoral Fellowship (C.T.), a Society in Science – Branco Weiss Fellowship (C.T.), NIH 1R01GM086237 (M.B. & S.S.), NIH 8U54GM103529 (M.B. & S.S.), NIH 1R01AI076318 (R.S), NIH 1R01CA140214 (R.S), NSF CMMI-1100430 (P.L.), NSF CMMI-0856187 (P.L.), NSF CMMI-1160840 (P.L.), ONR N000140910215 (P.L.), and NSF CPS-1135850 (P.L.).
PY - 2013/8
Y1 - 2013/8
N2 - The integration of synthetic and cell-free biology has made tremendous strides towards creating artificial cellular nanosystems using concepts from solution-based chemistry, where only the concentrations of reacting species modulate gene expression rates. However, it is known that macromolecular crowding, a key feature in natural cells, can dramatically influence biochemical kinetics via volume exclusion effects, which reduce diffusion rates and enhance binding rates of macromolecules. Here, we demonstrate that macromolecular crowding can increase the robustness of gene expression by integrating synthetic cellular components of biological circuits and artificial cellular nanosystems. Furthermore, we reveal how ubiquitous cellular modules, including genetic components, a negative feedback loop and the size of the crowding molecules can fine-tune gene circuit response to molecular crowding. By bridging a key gap between artificial and living cells, our work has implications for efficient and robust control of both synthetic and natural cellular circuits.
AB - The integration of synthetic and cell-free biology has made tremendous strides towards creating artificial cellular nanosystems using concepts from solution-based chemistry, where only the concentrations of reacting species modulate gene expression rates. However, it is known that macromolecular crowding, a key feature in natural cells, can dramatically influence biochemical kinetics via volume exclusion effects, which reduce diffusion rates and enhance binding rates of macromolecules. Here, we demonstrate that macromolecular crowding can increase the robustness of gene expression by integrating synthetic cellular components of biological circuits and artificial cellular nanosystems. Furthermore, we reveal how ubiquitous cellular modules, including genetic components, a negative feedback loop and the size of the crowding molecules can fine-tune gene circuit response to molecular crowding. By bridging a key gap between artificial and living cells, our work has implications for efficient and robust control of both synthetic and natural cellular circuits.
UR - http://www.scopus.com/inward/record.url?scp=84881321639&partnerID=8YFLogxK
UR - http://www.scopus.com/inward/citedby.url?scp=84881321639&partnerID=8YFLogxK
U2 - 10.1038/nnano.2013.132
DO - 10.1038/nnano.2013.132
M3 - Article
C2 - 23851358
AN - SCOPUS:84881321639
SN - 1748-3387
VL - 8
SP - 602
EP - 608
JO - Nature Nanotechnology
JF - Nature Nanotechnology
IS - 8
ER -