TY - JOUR
T1 - Recapturing and trapping single molecules with a solid-state nanopore
AU - Gershow, Marc
AU - Golovchenko, J. A.
N1 - Funding Information:
This work was supported by NIH/NGRI grant no. 5 R01 HG00370302. Some fabrication was carried out at Harvard University’s Center for Nanoscale Systems, with the assistance of D. Bell, Yuan Lu and J.D. Deng. We thank E. Brandin for preparing the molecules for the trapping experiment, S. Coutreau and P. Testa for machining assistance, Jiali Li, D. Branton, S. Bezrukov, D. Hoogerheide and D. Vlassarev for useful discussions, and M. Biercuk for valuable suggestions regarding the manuscript. Correspondence and requests for materials should be addressed to J.A.G. Supplementary information accompanies this paper on www.nature.com/naturenanotechnology.
PY - 2007/12
Y1 - 2007/12
N2 - The development of solid-state nanopores, inspired by their biological counterparts, shows great potential for the study of single macromolecules. Applications such as DNA sequencing and the exploration of protein folding require control of the dynamics of the molecule's interaction with the pore, but DNA capture by a solid-state nanopore is not well understood. By recapturing individual molecules soon after they pass through a nanopore, we reveal the mechanism by which double-stranded DNA enters the pore. The observed recapture rates and times agree with solutions of a drift-diffusion model. Electric forces draw DNA to the pore over micrometer-scale distances, and upon arrival at the pore, molecules begin translocation almost immediately. Repeated translocation of the same molecule improves measurement accuracy, offers a way to probe the chemical transformations and internal dynamics of macromolecules on sub-millisecond time and sub-micrometre length scales, and demonstrates the ability to trap, study and manipulate individual macromolecules in solution.
AB - The development of solid-state nanopores, inspired by their biological counterparts, shows great potential for the study of single macromolecules. Applications such as DNA sequencing and the exploration of protein folding require control of the dynamics of the molecule's interaction with the pore, but DNA capture by a solid-state nanopore is not well understood. By recapturing individual molecules soon after they pass through a nanopore, we reveal the mechanism by which double-stranded DNA enters the pore. The observed recapture rates and times agree with solutions of a drift-diffusion model. Electric forces draw DNA to the pore over micrometer-scale distances, and upon arrival at the pore, molecules begin translocation almost immediately. Repeated translocation of the same molecule improves measurement accuracy, offers a way to probe the chemical transformations and internal dynamics of macromolecules on sub-millisecond time and sub-micrometre length scales, and demonstrates the ability to trap, study and manipulate individual macromolecules in solution.
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U2 - 10.1038/nnano.2007.381
DO - 10.1038/nnano.2007.381
M3 - Article
C2 - 18654430
AN - SCOPUS:36849062184
SN - 1748-3387
VL - 2
SP - 775
EP - 779
JO - Nature Nanotechnology
JF - Nature Nanotechnology
IS - 12
ER -